Campylobacter jejuni CJP19-D996 |
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Putative Campylobacter jejuni CJP19-D996 RM systems
Ref: Hoffman,M. et al. unpublished
REBASE ref # 31842
Complete sequence: 1,692,969 bp
GenBank #: CP066745
REBASE acronym: CjeD996
Org_num: 47034
All begin JG534_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 3995 | molecular chaperone DnaK | |||
| 4000 | M | M.CjeP4549ORF3710P (100% identity) | TAAYNNNNNNCTG | M.CjeD996ORF4000P |
| 4005 | S | S.Cje5158ORF5530P (100% identity) | TAAYNNNNNNCTG | S.CjeD996ORF4000P |
| 4010 | AAA family ATPase | |||
| 4015 | R | Cje32488IIIP (100% identity) | TAAYNNNNNNCTG | CjeD996ORF4000P |
| 4020 | MBL fold metallo-hydrolase | |||
| 7795 | NAD(P)-dependent alcohol dehydrogenase | |||
| 7800 | R | CjeD2600ORFDP (100% identity) | CjeD996ORF7825P | |
| 7805 | ATP-binding protein | |||
| 7810 | RloB domain-containing protein | |||
| 7815 | S | S.Cje264IV (100% identity) | S.CjeD996ORF7825P | |
| 7820 | Fic family protein | |||
| 7825 | M | M.CjeZP3204ORF8445P (100% identity) | M.CjeD996ORF7825P | |
| 7830 | carboxymuconolactone decarboxylase family | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 175 | PD-(D/E)XK nuclease family protein | |||
| 180 | RM | CjeYH002II (100% identity) | CCYGA | CjeD996ORF180P |
| 185 | pentapeptide repeat-containing protein | |||
| 1040 | translation initiation factor IF-3 | |||
| 1045 | M | M.CjeR73ORF1025P (100% identity) | RAATTY | M.CjeD996ORF1045P |
| 1050 | autotransporter outer membrane beta-barrel | |||
| 1230 | dihydroorotase | |||
| 1235 | RM | Cje264ORF400P (100% identity) | CjeD996ORF1235P | |
| 1240 | class I SAM-dependent methyltransferase | |||
| 2810 | 95 aa hypothetical protein | |||
| 2815 | M | M.Cje264ORF9435P (100% identity) | M.CjeD996ORF2815P | |
| 2820 | phage virion morphogenesis protein | |||
| 3675 | acetate kinase | |||
| 3680 | RM | Csp93224ORF3385P (100% identity) | GKAAGC | CjeD996ORF3680P |
| 3685 | 163 aa hypothetical protein | |||
| 5425 | NAD-dependent deacetylase | |||
| 5430 | RM | CjeD2600ORFIP (100% identity) | CjeD996ORF5430P | |
| 5435 | endonuclease MutS2 | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1370 | lipid-A-disaccharide synthase | |||
| 1375 | R | Csp93256ORF1410P (100% identity) | CjeD996ORF1385P | |
| 1380 | 245 aa hypothetical protein | |||
| 1385 | M | M.Csp93256ORF1410P (100% identity) | M.CjeD996ORF1385P | |
| 1390 | lipid-A-disaccharide synthase | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 700 | ribosome maturation factor RimP | |||
| 705 | R | Csp93224McrBP (100% identity) | CjeD996McrBP | |
| 710 | R | Cje264McrCP (100% identity) | CjeD996McrCP | |
| 715 | metal ABC transporter permease | |||