Neisseria gonorrhoeae ATCC 49226 |
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Putative Neisseria gonorrhoeae ATCC 49226 RM systems
Ref: Gao,L. et al. unpublished
REBASE ref # 32183
Complete sequence: 2,069,529 bp
GenBank #: CP045728
REBASE acronym: Ngo49226
Org_num: 48524
All begin GAY22_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 2110 | ADP-glyceromanno-heptose 6-epimerase | |||
| 2115 | M | M.NgoFA19ORF148P (100% identity) | GCANNNNNNGTC | M.Ngo49226ORF2115P |
| 2120 | DNA damage-inducible protein D | |||
| 2125 | S | S.NgoWMII (100% identity) | GCANNNNNNGTC | S.Ngo49226ORF2115P |
| 2130 | R | NgoWNIIP (100% identity) | GCANNNNNNGTC | Ngo49226ORF2115P |
| 2135 | ATP-dependent Clp protease ATP-binding subunit | |||
| 3545 | AAA family ATPase | |||
| 3550 | R | NgoWOIP (100% identity) | GAGNNNNNTAC | Ngo49226ORF3575P |
| 3555 | hydroxyacid dehydrogenase | |||
| 3560 | S | S.Ngos1291I (100% identity) | GAGNNNNNTAC | S.Ngo49226ORF3575P |
| 3565 | 186 aa hypothetical protein | |||
| 3570 | 279 aa hypothetical protein | |||
| 3575 | M | M.Ngo49226aORF4465P (100% identity) | GAGNNNNNTAC | M.Ngo49226ORF3575P |
| 3580 | ABC transporter | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 30 | leucine--tRNA ligase | |||
| ??? | M | M1.Ngo8254IV (100% identity) | GATC | M1.Ngo49226ORF35P |
| 40 | M | M2.Ngo49226aORF35P (100% identity) | GATC | M2.Ngo49226ORF35P |
| 45 | 184 aa hypothetical protein | |||
| 1555 | phenylalanine--tRNA ligase subunit alpha | |||
| 1560 | V | V.NgoWSORF391P (100% identity) | V.Ngo49226ORF1565P | |
| ??? | M | M.NgoTFGB2ORF299P (100% identity) | M.Ngo49226ORF1565P | |
| 1575 | R | NgoWSORF391P (100% identity) | Ngo49226ORF1565P | |
| 1580 | phenylalanine--tRNA ligase subunit beta | |||
| 1865 | IS1595 family transposase | |||
| 1870 | RM | Ngos1291ORF7515P (100% identity) | GACNNNNNTGA | Ngo49226ORF1870P |
| 1875 | S | S.Ngos1291ORF7515P (100% identity) | GACNNNNNTGA | S.Ngo49226ORF1870P |
| 1880 | 141 aa hypothetical protein | |||
| 1900 | uroporphyrinogen decarboxylase | |||
| 1905 | H | H.Ngos1291ORF7560P (100% identity) | H.Ngo49226ORF1915P | |
| 1910 | R | Ngos1291ORF7560P (100% identity) | GCSGC | Ngo49226ORF1915P |
| 1915 | M | M.Ngos1291ORF7560P (100% identity) | GCSGC | M.Ngo49226ORF1915P |
| 1920 | DNA repair protein RadA | |||
| 3440 | 3-isopropylmalate dehydrogenase | |||
| 3445 | R | NgoWSORF784P (100% identity) | GGNNCC | Ngo49226ORF3450P |
| 3450 | M | M.NmeMBW2ORFJP (100% identity) | GGNNCC | M.Ngo49226ORF3450P |
| 3455 | 3-isopropylmalate dehydratase small subunit | |||
| 4455 | anthranilate synthase component I | |||
| 4460 | M | M.NgoWLORF1156P (100% identity) | GCCGGC | M.Ngo49226ORF4460P |
| 4465 | R | Ngos1291ORF10080P (100% identity) | GCCGGC | Ngo49226ORF4460P |
| 4470 | 5-(carboxyamino)imidazole ribonucleotide | |||
| 5830 | 48 aa hypothetical protein | |||
| ??? | M | M.NgoN160ORF5915P (100% identity) | M.Ngo49226ORF5835P | |
| 5845 | R | NgoWSORF1801P (98% identity) | Ngo49226ORF5835P | |
| 5850 | V | V.Ngos1291ORF65P (100% identity) | V.Ngo49226ORF5835P | |
| 5855 | TIGR01621 family pseudouridine synthase | |||
| 9170 | FUSC family protein | |||
| 9175 | R | Ngos1291ORF3515P (100% identity) | GGCC | Ngo49226ORF9180P |
| 9180 | M | M.NgoSH240ORFKP (100% identity) | GGCC | M.Ngo49226ORF9180P |
| 9185 | ribosome recycling factor | |||
| 9745 | 93 aa hypothetical protein | |||
| 9750 | R | NgoWSIIIP (100% identity) | GGTGA | Ngo49226ORF9755P |
| 9755 | M | M1.NgoFA19I (100% identity) | GGTGA | M1.Ngo49226ORF9755P |
| 9760 | M | M1.NgoWSIII (100% identity) | GGTGA | M2.Ngo49226ORF9755P |
| 9765 | S1 RNA-binding domain-containing protein | |||
| 10290 | GTPase ObgE | |||
| 10295 | M | M.Ngos1291ORF4640P (100% identity) | RGCGCY | M.Ngo49226ORF10295P |
| 10300 | R | Ngos1291ORF4640P (100% identity) | RGCGCY | Ngo49226ORF10295P |
| 10305 | cysteine--tRNA ligase | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2780 | peptidyl-prolyl cis-trans isomerase | |||
| 2785 | M | M.Ngos1291ORF8455P (100% identity) | CCACC | M.Ngo49226ORF2785P |
| 2790 | R | Ngos1291ORF8455P (100% identity) | CCACC | Ngo49226ORF2785P |
| 2795 | tRNA 2-thiocytidine(32) synthetase TtcA | |||
| 3255 | L-lactate dehydrogenase | |||
| 3260 | R | NgoWLORF910P (100% identity) | Ngo49226ORF3265P | |
| ??? | M | M.Ngo13818II (99% identity) | M.Ngo49226ORF3265P | |
| 3275 | tRNA pseudouridine(55) synthase TruB | |||