Putative Neisseria gonorrhoeae 20181204 RM systems
Ref: Guglielmino,C.J.D. unpublished
REBASE ref # 29633
Complete sequence: 2,171,354 bp
GenBank #: CP068761
REBASE acronym: Ngo1204
Org_num: 48523
All begin JMJ48_
Type I | ||||
---|---|---|---|---|
ORF | Gene | Most similar | Specificity | Name |
2045 | ADP-glyceromanno-heptose 6-epimerase | |||
2050 | M | M.Ngos1291ORF7750P (100% identity) | GCANNNNNNNGTC | M.Ngo1204ORF2050P |
2055 | DNA damage-inducible protein D | |||
2060 | S | S.NgoWNII (100% identity) | GCANNNNNNNGTC | S.Ngo1204ORF2050P |
2065 | R | Ngo8ORF2075P (100% identity) | GCANNNNNNNGTC | Ngo1204ORF2050P |
2070 | ATP-dependent Clp protease ATP-binding subunit | |||
3500 | replication-associated recombination protein A | |||
3505 | R | NgoPID1ORF461P (99% identity) | GAGNNNNNTAC | Ngo1204ORF3530P |
3510 | hydroxyacid dehydrogenase | |||
3515 | S | S.Ngos1291I (100% identity) | GAGNNNNNTAC | S.Ngo1204ORF3530P |
3520 | 186 aa hypothetical protein | |||
3525 | 282 aa hypothetical protein | |||
3530 | M | M.NgoJH14ORFMP (99% identity) | GAGNNNNNTAC | M.Ngo1204ORF3530P |
3535 | ABC transporter | |||
Type II | ||||
ORF | Gene | Most similar | Specificity | Name |
30 | leucine--tRNA ligase | |||
35 | R | Ngos1291ORF5750P (100% identity) | GATC | Ngo1204ORF35P |
40 | site-specific DNA-methyltransferase | |||
35 | restriction endonuclease | |||
40 | M | M.Ngos1291ORF5755P (100% identity) | M.Ngo1204ORF40P | |
45 | 184 aa hypothetical protein | |||
1520 | phenylalanine--tRNA ligase subunit alpha | |||
1525 | V | V.NgoWSORF391P (100% identity) | V.Ngo1204ORF1530P | |
??? | M | M.NgoWSORF391P (100% identity) | M.Ngo1204ORF1530P | |
1540 | HNH endonuclease | |||
1810 | IS1595 family transposase | |||
1815 | RM | Ngos1291ORF7515P (100% identity) | GACNNNNNTGA | Ngo1204ORF1815P |
1820 | S | S.Ngos1291ORF7515P (100% identity) | GACNNNNNTGA | S.Ngo1204ORF1815P |
1825 | 140 aa hypothetical protein | |||
1845 | uroporphyrinogen decarboxylase | |||
1850 | H | H.Ngos1291ORF7560P (100% identity) | H.Ngo1204ORF1860P | |
1855 | R | Ngos1291ORF7560P (100% identity) | GCSGC | Ngo1204ORF1860P |
1860 | M | M.Ngos1291ORF7560P (100% identity) | GCSGC | M.Ngo1204ORF1860P |
1865 | DNA repair protein RadA | |||
3395 | 3-isopropylmalate dehydrogenase | |||
3400 | R | NgoWPORF778P (100% identity) | GGNNCC | Ngo1204ORF3405P |
3405 | M | M.NmeMBW2ORFJP (100% identity) | GGNNCC | M.Ngo1204ORF3405P |
3410 | 3-isopropylmalate dehydratase small subunit | |||
4375 | anthranilate synthase component I | |||
4380 | M | M.Ngos1291ORF10080P (100% identity) | GCCGGC | M.Ngo1204ORF4380P |
4385 | R | Ngos1291ORF10080P (100% identity) | GCCGGC | Ngo1204ORF4380P |
4390 | 5-(carboxyamino)imidazole ribonucleotide | |||
5710 | replication initiation factor domain-containing | |||
5715 | V | V.Ngos1291ORF65P (100% identity) | V.Ngo1204ORF5725P | |
5720 | R | Ngos1291ORF65P (100% identity) | Ngo1204ORF5725P | |
5725 | M | M.NgoD159ORF475BP (100% identity) | M.Ngo1204ORF5725BP | |
5730 | M | M.NgoD159ORF475AP (96% identity) | M.Ngo1204ORF5725AP | |
5735 | 48 aa hypothetical protein | |||
5920 | excinuclease ABC subunit UvrA | |||
5925 | R | Ngos1291ORF260P (100% identity) | CCGCGG | Ngo1204ORF5930P |
5930 | M | M.Ngos1291ORF260P (100% identity) | CCGCGG | M.Ngo1204ORF5930P |
5935 | transposase | |||
9195 | FUSC family protein | |||
9200 | R | Ngos1291ORF3515P (100% identity) | GGCC | Ngo1204ORF9205P |
9205 | M | M.Ngos1291ORF3515P (100% identity) | GGCC | M.Ngo1204ORF9205P |
9210 | ribosome recycling factor | |||
9760 | 93 aa hypothetical protein | |||
9765 | R | NgoWSIIIP (100% identity) | GGTGA | Ngo1204ORF9770P |
9770 | M | M1.Ngos1291II (100% identity) | GGTGA | M1.Ngo1204ORF9770P |
9775 | M | M2.Ngos1291II (100% identity) | GGTGA | M2.Ngo1204ORF9770P |
9780 | RNA-binding transcriptional accessory protein | |||
10320 | GTPase ObgE | |||
10325 | M | M.Ngos1291ORF4640P (100% identity) | RGCGCY | M.Ngo1204ORF10325P |
10330 | R | Ngos1291ORF4640P (100% identity) | RGCGCY | Ngo1204ORF10325P |
10335 | cysteine--tRNA ligase | |||
Type III | ||||
ORF | Gene | Most similar | Specificity | Name |
2750 | peptidyl-prolyl cis-trans isomerase | |||
2755 | M | M.NgoTFGA2ORF1109P (100% identity) | CCACC | M.Ngo1204ORF2755P |
2760 | R | Ngos1291ORF8455P (100% identity) | CCACC | Ngo1204ORF2755P |
2765 | tRNA 2-thiocytidine(32) synthetase TtcA | |||
3210 | alpha-hydroxy-acid oxidizing protein | |||
3215 | R | Ngo690ORF3240P (100% identity) | ACACC | Ngo1204ORF3220P |
3220 | M | M.Nme510612ORF1764P (96% identity) | ACACC | M.Ngo1204ORF3220P |
3225 | tRNA pseudouridine(55) synthase TruB |