Escherichia coli MS1170 |
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Putative Escherichia coli MS1170 RM systems
Ref: Li,T. et al. J Glob Antimicrob Resist 23, 401-403 (2020)
REBASE ref # 31838
| Sequence length: | GenBank #: | |
| Chromosome: | 4,735,839 bp | CP056077 |
| plasmid pMS1170_1: | 122,112 bp | CP056076 |
REBASE acronym: Eco1170
Org_num: 46663
All begin HED12_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 6980 | adenine/cytosine-specific restriction | |||
| 6985 | R | Eco266ORF19185P (100% identity) | Eco1170ORF6990P | |
| 6990 | M | M.Eco266ORF19185P (100% identity) | M.Eco1170ORF6990P | |
| 6995 | S | S.Eco266ORF19185P (100% identity) | S.Eco1170ORF6990P | |
| 7000 | endoribonuclease SymE | |||
| 7335 | WYL domain-containing protein | |||
| 7340 | R | Eco266ORF19540P (100% identity) | Eco1170ORF7345P | |
| 7345 | M | M.Eco266ORF19540P (100% identity) | M.Eco1170ORF7345P | |
| 7350 | S | S.Eco266ORF19540P (100% identity) | S.Eco1170ORF7345P | |
| 7355 | SIR2 family protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 5285 | flagellar basal body P-ring formation protein | |||
| 5290 | M | M.Eco8621ORF4119P (99% identity) | M.Eco1170ORF5290P | |
| 5295 | R | EcoSC455ORFAP (100% identity) | Eco1170ORF5290P | |
| 5300 | flagellar biosynthesis anti-sigma factor FlgM | |||
| 7250 | HNH endonuclease | |||
| 7255 | R | EcoCU42ET1ORF3360P (100% identity) | Eco1170ORF7255P | |
| 7260 | 59 aa hypothetical protein | |||
| 12095 | cell division protein DamX | |||
| 12100 | M | M.SspPIBDamP (100% identity) | GATC | M.Eco1170DamP |
| 12105 | ribulose-phosphate 3-epimerase | |||
| 12695 | DUF2556 family protein | |||
| 12700 | M | M.PmeBin470ORFAP (99% identity) | ATGCAT | M.Eco1170ORF12700P |
| 12705 | DNA-binding transcriptional regulator Fis | |||
| 19635 | phosphohydrolase | |||
| 19640 | M | M.SflC32DcmP (100% identity) | CCWGG | M.Eco1170DcmP |
| 19645 | V | V.SflC32DcmP (74% identity) | V.Eco1170DcmP | |
| 19650 | drug/metabolite exporter YedA | |||
| plasmid pMS1170_1 | ||||
| 650 | 73 aa hypothetical protein | |||
| 655 | M | M.SspPIBORF23080P (100% identity) | M.Eco1170ORF655P | |
| 660 | 103 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 6975 | GTPase | |||
| 6980 | R | Eco266MrrP (100% identity) | Eco1170MrrP | |
| 6985 | type I restriction-modification system | |||
| 7000 | endoribonuclease SymE | |||
| 7005 | R | Eco266McrBP (100% identity) | Eco1170McrBP | |
| 7010 | R | Eco266McrCP (100% identity) | Eco1170McrCP | |