Citrobacter freundii PSV |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Citrobacter freundii PSV RM systems
Ref: Plewniak,F. unpublished
REBASE ref # 18171
| Sequence length: | GenBank #: | |
| chromosome PSV: | 5,233,206 bp | LR881934 |
| plasmid pPSV: | 295,415 bp | LR881935 |
REBASE acronym: CfrPSV
Org_num: 47099
All begin CITRO_, CITRO_P
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| chromosome PSV | ||||
| 1423 | conserved membrane protein of unknown function | |||
| 1424 | R | Csp944ORF6990P (96% identity) | CfrPSVORF1427P | |
| 1425 | conserved protein of unknown function | |||
| 1426 | S | S.AveAGM2ORF11680P (49% identity) | S.CfrPSVORF1427P | |
| 1427 | M | M.Csp944ORF6990P (90% identity) | M.CfrPSVORF1427P | |
| 1428 | aminoglycoside/multidrug efflux system | |||
| 4294 | Restriction endonuclease | |||
| 4295 | R | CfrC05ORF20685P (100% identity) | CfrPSVORF4296P | |
| 4296 | M | M.CfrC05ORF20685P (100% identity) | M.CfrPSVORF4296P | |
| 4297 | S | S.CfrC05ORF20685P (100% identity) | S.CfrPSVORF4296P | |
| 4298 | Endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| chromosome PSV | ||||
| 356 | Cell division protein DamX | |||
| 357 | M | M.Eco5172DamP (100% identity) | GATC | M.CfrPSVDamP |
| 358 | D-ribulose-5-phosphate 3-epimerase | |||
| 457 | DNA-binding transcriptional regulator | |||
| 458 | M | M.CspMGH103ORFEP (100% identity) | ATGCAT | M.CfrPSVORF458P |
| 459 | Site-specific integrase | |||
| 1119 | conserved protein of unknown function | |||
| 1120 | R | CfrC05ORF5635P (100% identity) | CfrPSVORF1120P | |
| 1121 | protein of unknown function | |||
| 1332 | conserved protein of unknown function | |||
| 1333 | M | M.CfrMH15ORF14685P (98% identity) | M.CfrPSVORF1333P | |
| 1334 | conserved protein of unknown function | |||
| 1344 | conserved protein of unknown function | |||
| 1345 | M | M.CfrPSVORFAP (86% identity) | M.CfrPSVORF1345P | |
| 1346 | Pyocin large subunit | |||
| 1940 | metal-dependent phosphohydrolase | |||
| 1941 | M | M.CfrC05ORF9560P (100% identity) | CCWGG | M.CfrPSVORF1941P |
| 1942 | V | V.CspS39ORF13780P (100% identity) | V.CfrPSVORF1941P | |
| 1943 | Uncharacterized inner membrane transporter YedA | |||
| 2109 | conserved protein of unknown function | |||
| ??? | M | M.CfrPSVORF1345P (86% identity) | M.CfrPSVORFAP | |
| 2110 | DNA methyltransferase | |||
| ??? | DNA cytosine methyltransferase | |||
| 2110 | M | M2.Eho66ORF5725P (98% identity) | M.CfrPSVORF2110P | |
| 2111 | conserved protein of unknown function | |||
| 2714 | conserved protein of unknown function | |||
| 2715 | M | M.Cfr286ORF13480P (90% identity) | M.CfrPSVORF2715P | |
| 2716 | DNA recombination-dependent growth factor C | |||
| 4329 | Toxic protein SymE | |||
| ??? | R | CfrL75ORF20650P (100% identity) | CfrPSVORF4330P | |
| 4331 | protein of unknown function | |||
| 4349 | conserved protein of unknown function | |||
| ??? | M | M.LadZ961ORF14160P (97% identity) | M.CfrPSVORF4350P | |
| 4351 | R | LadZ961ORF14160P (100% identity) | CfrPSVORF4350P | |
| 4352 | Helicase | |||
| 4631 | Crossover junction endodeoxyribonuclease rusA | |||
| 4632 | M | M2.Eco9094ORF1181P (98% identity) | M1.CfrPSVORF4632P | |
| 4633 | M | M2.Csp1013ORF22925P (96% identity) | M2.CfrPSVORF4632P | |
| 4634 | GntR family transcriptional regulator | |||
| plasmid pPSV | ||||
| 10 | DNA-binding protein | |||
| 11 | M | M1.SenF8025ORFBP (100% identity) | M.CfrPSVORF11P | |
| 12 | protein of unknown function | |||
| 161 | conserved protein of unknown function | |||
| ??? | M | M.Ksp484ORF30540P (100% identity) | M.CfrPSVORF162P | |
| 163 | Uncharacterized endonuclease HI_1296 | |||
| 291 | conserved protein of unknown function | |||
| 292 | M | M.SenZC055ORF24890P (100% identity) | M.CfrPSVORF292P | |
| 293 | conserved protein of unknown function | |||