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Putative Gordonia amarae ATCC 27808 RM systems
Ref: Batinovic,S. and Petrovski,S. unpublished
REBASE ref # 29225
Complete sequence: 5,289,363 bp
GenBank #: CP045810
REBASE acronym: Gam27808
Org_num: 47797
All begin GII30_
Type I | ||||
---|---|---|---|---|
ORF | Gene | Most similar | Specificity | Name |
12890 | response regulator | |||
12895 | M | M.Gam374ORF13105P (100% identity) | M.Gam27808ORF12895P | |
??? | S | S.Gam374ORF13105P (100% identity) | S.Gam27808ORF12895P | |
12905 | DUF262 domain-containing protein | |||
12910 | 147 aa hypothetical protein | |||
12915 | helix-turn-helix domain-containing protein | |||
12920 | DEAD/DEAH box helicase | |||
12925 | transposase | |||
12930 | IS30 family transposase | |||
12935 | IS256 family transposase | |||
12940 | Rpn family recombination-promoting | |||
12945 | 199 aa hypothetical protein | |||
12950 | 72 aa hypothetical protein | |||
12955 | PIN domain-containing protein | |||
12960 | R | Gam374ORF13105P (100% identity) | Gam27808ORF12895P | |
12965 | 358 aa hypothetical protein | |||
12895 | N-6 DNA methylase | |||
??? | S | S.Gam374ORF13105P (100% identity) | S.Gam27808ORF12900P | |
12905 | DUF262 domain-containing protein | |||
12955 | PIN domain-containing protein | |||
12960 | R | Gam374ORF13105P (100% identity) | Gam27808ORF12960P | |
12965 | 358 aa hypothetical protein | |||
22675 | 173 aa hypothetical protein | |||
22680 | R | Gam374ORF23180P (100% identity) | Gam27808ORF22715P | |
22685 | Rpn family recombination-promoting | |||
22690 | 139 aa hypothetical protein | |||
22695 | 145 aa hypothetical protein | |||
22700 | 24 aa hypothetical protein | |||
22705 | DUF262 domain-containing protein | |||
22710 | S | S.Gam374ORF23180P (100% identity) | S.Gam27808ORF22715P | |
22715 | M | M.Gam374ORF23180P (100% identity) | M.Gam27808ORF22715P | |
22720 | 634 aa hypothetical protein | |||
Type II | ||||
ORF | Gene | Most similar | Specificity | Name |
1215 | DUF499 domain-containing protein | |||
1220 | M | M.Gam368ORF1225P (100% identity) | M.Gam27808ORF1220P | |
1225 | 559 aa hypothetical protein | |||
1235 | 612 aa hypothetical protein | |||
1240 | V | V.Gam374ORF1245P (100% identity) | V.Gam27808ORF1245P | |
1245 | M | M.Gam374ORF1245P (100% identity) | M.Gam27808ORF1245P | |
1250 | alpha/beta fold hydrolase | |||
2495 | XRE family transcriptional regulator | |||
2500 | M | M.Gam374ORF2595P (100% identity) | M.Gam27808ORF2500P | |
2505 | 411 aa hypothetical protein | |||
8980 | DUF3618 domain-containing protein | |||
8990 | M | M.Gam374ORF9215P (100% identity) | M.Gam27808ORF8990P | |
8995 | DUF262 domain-containing protein | |||
8990 | modification methylase | |||
8995 | R | Gam374ORF9220P (100% identity) | Gam27808ORF8995P | |
9000 | excinuclease ABC subunit C | |||
14970 | 110 aa hypothetical protein | |||
14975 | M | M.Gsp91597ORF5320P (100% identity) | M.Gam27808ORF14975P | |
14980 | DUF262 domain-containing protein | |||
14975 | DNA methyltransferase | |||
14980 | R | Gam374ORF15295P (100% identity) | Gam27808ORF14980P | |
14985 | three-Cys-motif partner protein TcmP | |||
20405 | acyl-CoA dehydrogenase | |||
20410 | M | M.Gam374ORF20760P (100% identity) | M.Gam27808ORF20410P | |
20415 | R | Gam374ORF20765P (100% identity) | Gam27808ORF20410P | |
20420 | 101 aa hypothetical protein | |||
22230 | 151 aa hypothetical protein | |||
22235 | M | M.Gam374ORF22700P (100% identity) | M.Gam27808ORF22235P | |
22240 | AMP-binding protein | |||
Type IV | ||||
ORF | Gene | Most similar | Specificity | Name |
8350 | 298 aa hypothetical protein | |||
8355 | R | Gam368ORF8370P (100% identity) | Gam27808ORF8355P | |
8360 | DUF1707 domain-containing protein | |||
12900 | restriction endonuclease subunit S | |||
12905 | R | Gam372GmrSDP (100% identity) | Gam27808GmrSDP | |
12910 | 147 aa hypothetical protein | |||
13820 | Bcr/CflA family efflux MFS transporter | |||
13825 | R | Gam374McrBP (100% identity) | Gam27808McrBP | |
13830 | R | Gam374McrCP (100% identity) | Gam27808McrCP | |
13835 | ammonium transporter |