Klebsiella michiganensis BD-50-Km |
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Putative Klebsiella michiganensis BD-50-Km RM systems
Ref: Campos-Madueno,E.I. et al. unpublished
REBASE ref # 32025
| Sequence length: | GenBank #: | |
| Chromosome: | 6,330,740 bp | CP061930 |
| plasmid pBD-50-Km_3: | 135,663 bp | CP061933 |
| plasmid pBD-50-Km_VIM-1: | 196,307 bp | CP061931 |
REBASE acronym: KmiBD50
Org_num: 47861
All begin IE970_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 14455 | endoribonuclease SymE | |||
| 14460 | R | Ksp1ORF3115P (98% identity) | KmiBD50ORF14470P | |
| 14465 | S | S.Kmi34BORF24105P (99% identity) | S.KmiBD50ORF14470P | |
| 14470 | M | M.KpnKP51ORF13815P (99% identity) | M.KmiBD50ORF14470P | |
| 14475 | restriction endonuclease | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 3795 | DUF5405 family protein | |||
| 3800 | M | M.Sbo268ORF2744P (99% identity) | M.KmiBD50ORF3800P | |
| 3805 | replication endonuclease | |||
| 6960 | ATP-binding protein | |||
| 6965 | M | M.Sne174ORF10435P (100% identity) | M.KmiBD50ORF6965P | |
| 6970 | TIGR02646 family protein | |||
| 9015 | ribulose-phosphate 3-epimerase | |||
| 9020 | M | M.Ksp6FDamP (100% identity) | GATC | M.KmiBD50DamP |
| 9025 | cell division protein DamX | |||
| 14175 | ATP-binding protein | |||
| 14180 | M | M.Kox28ORF20120P (100% identity) | M.KmiBD50ORF14180P | |
| 14185 | HNH endonuclease | |||
| 20545 | DUF968 domain-containing protein | |||
| 20550 | M | M.KpnK516ORF27355P (100% identity) | M1.KmiBD50ORF20550P | |
| 20555 | M | M.KpnK516ORF27360P (100% identity) | M2.KmiBD50ORF20550P | |
| 20560 | YlcG family protein | |||
| 21960 | 3-5 exoribonuclease | |||
| 21965 | M | M2.Kmi9152ORF13945P (97% identity) | M.KmiBD50ORF21965P | |
| 21970 | 89 aa hypothetical protein | |||
| 21970 | 89 aa hypothetical protein | |||
| 21975 | M | M.Kva321ORFGP (89% identity) | M.KmiBD50ORF21975P | |
| 21980 | replication endonuclease | |||
| 21980 | replication endonuclease | |||
| 21985 | M | M.KpnsST307ORF16100P (94% identity) | M.KmiBD50ORF21985P | |
| 21990 | phage portal protein | |||
| 26575 | DUF1317 family protein | |||
| 26580 | M | M1.KmiKM41ORFHP (97% identity) | M1.KmiBD50ORF26580P | |
| 26585 | M | M2.Kmi5088ORF20915P (94% identity) | M2.KmiBD50ORF26580P | |
| 26590 | 73 aa hypothetical protein | |||
| 29695 | drug/metabolite exporter YedA | |||
| 29700 | V | V.KpnK516DcmP (100% identity) | V.KmiBD50DcmP | |
| 29705 | M | M.Kmi8BGDcmP (100% identity) | CCWGG | M.KmiBD50DcmP |
| 29710 | phosphohydrolase | |||
| 29935 | 88 aa hypothetical protein | |||
| 29940 | M | M.KmiKM41ORFCP (90% identity) | M.KmiBD50ORF29940P | |
| 29945 | 85 aa hypothetical protein | |||
| 29955 | 73 aa hypothetical protein | |||
| 29960 | M | M.Kox2ORF2059P (96% identity) | M.KmiBD50ORF29960P | |
| 29965 | DUF977 family protein | |||
| plasmid pBD-50-Km_3 | ||||
| 32860 | 73 aa hypothetical protein | |||
| 32865 | M | M.Rte9185ORF7915P (100% identity) | M.KmiBD50ORF32865P | |
| 32870 | 76 aa hypothetical protein | |||
| plasmid pBD-50-Km_VIM-1 | ||||
| 30620 | 143 aa hypothetical protein | |||
| 30625 | M | M.YrupYR1ORFCP (100% identity) | M.KmiBD50ORF30625P | |
| 30630 | 100 aa hypothetical protein | |||
| 30960 | 149 aa hypothetical protein | |||
| 30965 | M | M.Vch11614ORFCP (100% identity) | M.KmiBD50ORF30965P | |
| 30970 | 120 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 80 | shufflon system plasmid conjugative transfer | |||
| 85 | R | SflLIN8ORF9075P (99% identity) | CCGAG | KmiBD50ORF90P |
| 90 | M | M.Kpn185ORF8930P (100% identity) | CCGAG | M.KmiBD50ORF90P |
| 95 | SpnT protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 14180 | DNA cytosine methyltransferase | |||
| 14185 | R | Ror8M1ORF45210P (96% identity) | KmiBD50ORF14185P | |
| 14190 | 238 aa hypothetical protein | |||
| 14470 | type I restriction-modification system subunit | |||
| 14475 | R | KgrNY3MrrP (97% identity) | KmiBD50MrrP | |
| 14480 | PLP-dependent aminotransferase family protein | |||