Limosilactobacillus fermentum B44 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Limosilactobacillus fermentum B44 RM systems
Ref: Liu,J. unpublished
REBASE ref # 28504
Complete sequence: 2,110,953 bp
GenBank #: CP067088
REBASE acronym: LfeB44
Org_num: 48141
All begin JIO03_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 8170 | ATP-binding protein | |||
| 8175 | S | S.Lsa1046ORF1342P (54% identity) | S2.LfeB44ORF8195P | |
| 8180 | transposase | |||
| 8185 | IS3 family transposase | |||
| 8190 | S | S.Lsa1046ORF1342P (44% identity) | S1.LfeB44ORF8195P | |
| 8195 | M | M.Lsa1046ORF1342P (99% identity) | M.LfeB44ORF8195P | |
| 8200 | R | Lfe3285ORF2505P (99% identity) | LfeB44ORF8195P | |
| 8205 | C | C.Pac202ORF7245P (73% identity) | C.LfeB44ORF8195P | |
| 8210 | 95 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 5655 | EcsC family protein | |||
| 5660 | M | M.Lfe4ORFAP (100% identity) | M.LfeB44ORF5660P | |
| 5665 | RM | Lfe175ORF9985P (98% identity) | LfeB44ORF5660P | |
| 5670 | 250 aa hypothetical protein | |||
| 8295 | P27 family phage terminase small subunit | |||
| 8300 | M | M.LfeRC4ORF8465P (97% identity) | M.LfeB44ORF8300P | |
| 8305 | 223 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 9470 | 430 aa hypothetical protein | |||
| 9475 | R | LspC25ORF4705P (98% identity) | LfeB44ORF9480P | |
| 9480 | M | M.Lfe6620ORF4635P (38% identity) | M.LfeB44ORF9480BP | |
| 9485 | IS256 family transposase | |||
| 9490 | M | M.LreIIE43ORF6155P (30% identity) | M.LfeB44ORF9480AP | |
| 9495 | helix-turn-helix transcriptional regulator | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 8380 | recombinase family protein | |||
| 8385 | R | Lre03MrrP (100% identity) | LfeB44MrrP | |
| 8390 | 23S rRNA (uracil(1939)-C(5))-methyltransferase | |||
| 9045 | nucleotide pyrophosphohydrolase | |||
| 9050 | R | LfePC10ORF8590P (100% identity) | LfeB44ORF9050P | |
| 9055 | (deoxy)nucleoside triphosphate | |||