Salmonella enterica subsp. enterica serovar Derby 14-Sa79 |
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Putative Salmonella enterica subsp. enterica serovar Derby 14-Sa79 RM systems
Ref: Chen,K. et al. unpublished
REBASE ref # 31882
Complete sequence: 4,901,442 bp
GenBank #: CP066545
REBASE acronym: Sen14Sa79
Org_num: 46896
All begin JF569_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 11485 | 322 aa hypothetical protein | |||
| 11490 | R | SensTJX21ORF11885P (100% identity) | TACNNNNNNNGTTC | Sen14Sa79ORF11495P |
| 11495 | M | M.SensTJX21ORF11885P (100% identity) | TACNNNNNNNGTTC | M.Sen14Sa79ORF11495P |
| 11500 | S | S.SensTJX21ORF11885P (100% identity) | TACNNNNNNNGTTC | S.Sen14Sa79ORF11495P |
| 11505 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 5630 | drug/metabolite exporter YedA | |||
| 5635 | V | V.StyUK1DcmP (100% identity) | V.Sen14Sa79DcmP | |
| 5640 | M | M.SensTJX21DcmP (100% identity) | CCWGG | M.Sen14Sa79DcmP |
| 5645 | phosphohydrolase | |||
| 9355 | phage holin, lambda family | |||
| 9360 | M | M.SensSZL38ORF10585P (100% identity) | M.Sen14Sa79ORF9360P | |
| 9365 | 92 aa hypothetical protein | |||
| 9390 | LexA family transcriptional regulator | |||
| 9395 | M | M.SflN101ORF11410P (100% identity) | GATC | M.Sen14Sa79ORF9395P |
| 9400 | PerC family transcriptional regulator | |||
| 11630 | YebC/PmpR family DNA-binding transcriptional | |||
| 11635 | R | SensTJX21ORF12025P (100% identity) | Sen14Sa79ORF11635P | |
| 11640 | fosfomycin resistance glutathione transferase | |||
| 11660 | RM | SensTJX21ORF12050P (100% identity) | Sen14Sa79ORF11660P | |
| 11665 | DEAD/DEAH box helicase | |||
| 13240 | LexA family transcriptional regulator | |||
| 13245 | M | M.Sso90ORF15820P (100% identity) | GATC | M.Sen14Sa79ORF13245P |
| 13250 | helix-turn-helix domain-containing protein | |||
| 13295 | 173 aa hypothetical protein | |||
| 13300 | M | M.Sen60804ORF21505P (100% identity) | M.Sen14Sa79ORF13300P | |
| 13305 | 3-5 exoribonuclease | |||
| 16960 | cell division protein DamX | |||
| 16965 | M | M.StyTDamP (100% identity) | GATC | M.Sen14Sa79DamP |
| 16970 | ribulose-phosphate 3-epimerase | |||
| 17450 | DUF2556 family protein | |||
| 17455 | M | M.StyUK1III (100% identity) | ATGCAT | M.Sen14Sa79ORF17455P |
| 17460 | DNA-binding transcriptional regulator Fis | |||
| 18410 | 55 aa hypothetical protein | |||
| 18415 | M | M.YpsF1ORFCP (100% identity) | M.Sen14Sa79ORF18415P | |
| 18420 | thermonuclease family protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 9005 | 33 aa hypothetical protein | |||
| 9010 | R | StyUK1IP (99% identity) | CAGAG | Sen14Sa79ORF9015P |
| 9015 | M | M.SensTJX21ORF9690P (100% identity) | CAGAG | M.Sen14Sa79ORF9015P |
| 9020 | MFS transporter | |||