Salmonella enterica subsp. enterica serovar Heidelberg CVM 20760 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Salmonella enterica subsp. enterica serovar Heidelberg CVM 20760 RM systems
Ref: Zhao,S. et al. Genes (Basel) 11 (9), E1025 (2020)
REBASE ref # 31880
| Sequence length: | GenBank #: | |
| Chromosome: | 4,744,872 bp | CP051410 |
| plasmid p20760-1: | 125,574 bp | CP051411 |
| plasmid p20760-2: | 232,583 bp | CP051412 |
REBASE acronym: Sen20760
Org_num: 46901
All begin HFQ56_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 19415 | restriction endonuclease | |||
| 19420 | R | StyUK1IIP (99% identity) | GAGNNNNNNRTAYG | Sen20760ORF19425P |
| 19425 | M | M.Sens12373ORF19415P (100% identity) | GAGNNNNNNRTAYG | M.Sen20760ORF19425P |
| 19430 | S | S.StyUK1II (100% identity) | GAGNNNNNNRTAYG | S.Sen20760ORF19425P |
| 19435 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1820 | cell division protein DamX | |||
| 1825 | M | M.StyTDamP (100% identity) | GATC | M.Sen20760DamP |
| 1830 | ribulose-phosphate 3-epimerase | |||
| 2310 | DUF2556 family protein | |||
| 2315 | M | M.StyUK1III (100% identity) | ATGCAT | M.Sen20760ORF2315P |
| 2320 | DNA-binding transcriptional regulator Fis | |||
| 8990 | phosphohydrolase | |||
| 8995 | M | M.SenZ223DcmP (100% identity) | CCWGG | M.Sen20760DcmP |
| 9000 | V | V.StyTDcmP (100% identity) | V.Sen20760DcmP | |
| 9005 | drug/metabolite exporter YedA | |||
| 14075 | YqaJ viral recombinase family protein | |||
| ??? | M | M.SenS321ORF16155P (100% identity) | GATC | M.Sen20760ORF14080P |
| 14085 | DUF4060 family protein | |||
| 19555 | YebC/PmpR family DNA-binding transcriptional | |||
| 19560 | R | Sens12373ORF19550P (100% identity) | Sen20760ORF19560P | |
| 19565 | fosfomycin resistance glutathione transferase | |||
| 19585 | RM | Sens12373ORF19575P (100% identity) | GATCAG | Sen20760ORF19585P |
| 19590 | DEAD/DEAH box helicase | |||
| plasmid p20760-1 | ||||
| 23255 | 104 aa hypothetical protein | |||
| 23260 | M | M.SspPIBORF23080P (100% identity) | M.Sen20760ORF23260P | |
| 23265 | 73 aa hypothetical protein | |||
| plasmid p20760-2 | ||||
| 23875 | 55 aa hypothetical protein | |||
| 23880 | M | M.YpsF1ORFCP (100% identity) | M.Sen20760ORF23880P | |
| 23885 | thermonuclease family protein | |||
| 24315 | DNA-binding protein | |||
| 24320 | M | M.YpsF1ORFDP (100% identity) | M.Sen20760ORF24320P | |
| 24325 | 277 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 17145 | 33 aa hypothetical protein | |||
| 17150 | R | Sens12373ORF17180P (99% identity) | CAGAG | Sen20760ORF17155P |
| 17155 | M | M.SenZ223ORF2150P (100% identity) | CAGAG | M.Sen20760ORF17155P |
| 17160 | MFS transporter | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 19410 | BrnT family toxin | |||
| 19415 | R | StyUK1MrrP (100% identity) | Sen20760MrrP | |
| 19420 | type I restriction-modification system | |||