Salmonella enterica subsp. enterica serovar Typhimurium CVM 20762 |
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Putative Salmonella enterica subsp. enterica serovar Typhimurium CVM 20762 RM systems
Ref: Zhao,S. et al. Genes (Basel) 11 (9), E1025 (2020)
REBASE ref # 31880
| Sequence length: | GenBank #: | |
| Chromosome: | 4,820,130 bp | CP051404 |
| plasmid p20762-1: | 99,003 bp | CP051405 |
| plasmid p20762-2: | 95,919 bp | CP051406 |
REBASE acronym: Sen20762
Org_num: 46933
All begin HFQ58_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 19820 | restriction endonuclease | |||
| 19825 | R | StyUK1IIP (100% identity) | GAGNNNNNNRTAYG | Sen20762ORF19830P |
| 19830 | M | M.StyUK1II (100% identity) | GAGNNNNNNRTAYG | M.Sen20762ORF19830P |
| 19835 | S | S.StyUK1II (100% identity) | GAGNNNNNNRTAYG | S.Sen20762ORF19830P |
| 19840 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1820 | cell division protein DamX | |||
| 1825 | M | M.StyTDamP (100% identity) | GATC | M.Sen20762DamP |
| 1830 | ribulose-phosphate 3-epimerase | |||
| 2315 | DUF2556 family protein | |||
| 2320 | M | M.StyUK1III (100% identity) | ATGCAT | M.Sen20762ORF2320P |
| 2325 | DNA-binding transcriptional regulator Fis | |||
| 5915 | ead/Ea22-like family protein | |||
| 5920 | M | M.Sens29958ORF6205P (100% identity) | M.Sen20762ORF5920P | |
| 5925 | DUF550 domain-containing protein | |||
| 9245 | PerC family transcriptional regulator | |||
| 9250 | M | M.StyUK1V (100% identity) | GATC | M.Sen20762ORF9250P |
| 9255 | RusA family crossover junction | |||
| 9485 | phosphohydrolase | |||
| 9490 | M | M.StyUK1Dcm (100% identity) | CCWGG | M.Sen20762DcmP |
| 9495 | V | V.StyUK1DcmP (100% identity) | V.Sen20762DcmP | |
| 9500 | drug/metabolite exporter YedA | |||
| 19980 | BREX system P-loop protein BrxC | |||
| 19985 | RM | StyUK1IV (100% identity) | GATCAG | Sen20762ORF19985P |
| 19990 | AAA family ATPase | |||
| plasmid p20762-1 | ||||
| 23765 | 103 aa hypothetical protein | |||
| 23770 | M | M.StyR64ORFAP (100% identity) | M.Sen20762ORF23770P | |
| 23775 | 73 aa hypothetical protein | |||
| plasmid p20762-2 | ||||
| 24380 | 118 aa hypothetical protein | |||
| 24385 | M | M.StyUK1ORFAP (100% identity) | M.Sen20762ORF24385P | |
| 24390 | 73 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 17630 | 33 aa hypothetical protein | |||
| 17635 | R | StyUK1IP (99% identity) | CAGAG | Sen20762ORF17640P |
| 17640 | M | M.StyUK1I (100% identity) | CAGAG | M.Sen20762ORF17640P |
| 17645 | MFS transporter | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 19815 | BrnT family toxin | |||
| 19820 | R | StyUK1MrrP (100% identity) | Sen20762Mrr2P | |
| 19825 | type I restriction-modification system | |||