Salmonella enterica subsp. enterica serovar Saintpaul CVM 22543 |
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Putative Salmonella enterica subsp. enterica serovar Saintpaul CVM 22543 RM systems
Ref: Zhao,S. et al. Genes (Basel) 11 (9), E1025 (2020)
REBASE ref # 31880
| Sequence length: | GenBank #: | |
| Chromosome: | 4,736,183 bp | CP053055 |
| plasmid p22543: | 269,824 bp | CP053056 |
REBASE acronym: Sen22543
Org_num: 46923
All begin HFR56_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 19500 | 322 aa hypothetical protein | |||
| 19505 | R | Sen4085ORF3845P (100% identity) | GAGNNNNNNNRTCC | Sen22543ORF19510P |
| 19510 | M | M.Ssp6947I (100% identity) | GAGNNNNNNNRTCC | M.Sen22543ORF19510P |
| 19515 | S | S.SensIBG7b4ORF19375P (100% identity) | GAGNNNNNNNRTCC | S.Sen22543ORF19510P |
| 19520 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1920 | cell division protein DamX | |||
| 1925 | M | M.StyTDamP (100% identity) | GATC | M.Sen22543DamP |
| 1930 | ribulose-phosphate 3-epimerase | |||
| 2415 | DUF2556 family protein | |||
| 2420 | M | M.StyUK1III (100% identity) | ATGCAT | M.Sen22543ORF2420P |
| 2425 | DNA-binding transcriptional regulator Fis | |||
| 8880 | phosphohydrolase | |||
| 8885 | M | M.Sen4085DcmP (100% identity) | CCWGG | M.Sen22543DcmP |
| 8890 | V | V.StyUK1DcmP (100% identity) | V.Sen22543DcmP | |
| 8895 | drug/metabolite exporter YedA | |||
| 19645 | YebC/PmpR family DNA-binding transcriptional | |||
| 19650 | R | SenS25ORF20520P (100% identity) | Sen22543ORF19650P | |
| 19655 | malate transporter | |||
| 19655 | malate transporter | |||
| 19660 | M | M.SspZ69DndBP (100% identity) | M.Sen22543DndBP | |
| 19665 | DNA phosphorothioation system sulfurtransferase | |||
| 19660 | DNA sulfur modification protein DndB | |||
| 19665 | M | M.SenS25DndCP (100% identity) | M.Sen22543DndCP | |
| 19670 | DNA sulfur modification protein DndD | |||
| 19665 | DNA phosphorothioation system sulfurtransferase | |||
| 19670 | M | M.SenS0870DndDP (100% identity) | M.Sen22543DndDP | |
| 19675 | DNA sulfur modification protein DndE | |||
| 19670 | DNA sulfur modification protein DndD | |||
| 19675 | M | M.SspZ69DndEP (100% identity) | M.Sen22543DndEP | |
| 19680 | DUF262 domain-containing protein | |||
| 19680 | DUF262 domain-containing protein | |||
| 19685 | R | SenS25DptHP (100% identity) | Sen22543DptHP | |
| 19690 | DNA phosphorothioation-dependent restriction | |||
| 19685 | DNA phosphorothioation-dependent restriction | |||
| 19690 | R | SspZ69DptGP (100% identity) | Sen22543DptGP | |
| 19695 | DNA phosphorothioation-dependent restriction | |||
| 19690 | DNA phosphorothioation-dependent restriction | |||
| 19695 | R | SenS25DptFP (100% identity) | Sen22543DptFP | |
| 19700 | integrase arm-type DNA-binding domain-containing | |||
| plasmid p22543 | ||||
| 23280 | 55 aa hypothetical protein | |||
| 23285 | M | M.Ssp15303DcmP (100% identity) | M.Sen22543Dcm2P | |
| 23290 | thermonuclease family protein | |||
| 23755 | 106 aa hypothetical protein | |||
| 23760 | M | M.SmapR478ORF272P (100% identity) | M.Sen22543ORF23760P | |
| 23765 | 202 aa hypothetical protein | |||
| 23885 | DNA-binding protein | |||
| 23890 | M | M.Ssp15303ORFEP (100% identity) | M.Sen22543ORF23890P | |
| 23895 | 284 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 16940 | 33 aa hypothetical protein | |||
| 16945 | R | SenS133ORF17655P (100% identity) | CAGAG | Sen22543ORF16950P |
| 16950 | M | M.SspZ69ORF17325P (100% identity) | CAGAG | M.Sen22543ORF16950P |
| 16955 | MFS transporter | |||