Salmonella enterica subsp. enterica serovar Hadar CVM 24392 |
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Putative Salmonella enterica subsp. enterica serovar Hadar CVM 24392 RM systems
Ref: Zhao,S. et al. Genes (Basel) 11 (9), E1025 (2020)
REBASE ref # 31880
| Sequence length: | GenBank #: | |
| Chromosome: | 4,832,735 bp | CP051370 |
| plasmid p24392: | 101,673 bp | CP051371 |
REBASE acronym: Sen24392
Org_num: 46899
All begin HFS18_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 20140 | 322 aa hypothetical protein | |||
| 20145 | R | SenT075BORF19680P (100% identity) | CACNNNNNNNRTANYC | Sen24392ORF20150P |
| 20150 | M | M.SenT075BORF19680P (100% identity) | CACNNNNNNNRTANYC | M.Sen24392ORF20150P |
| 20155 | S | S.SenT075BORF19680P (100% identity) | CACNNNNNNNRTANYC | S.Sen24392ORF20150P |
| 20160 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1765 | cell division protein DamX | |||
| 1770 | M | M.StyTDamP (100% identity) | GATC | M.Sen24392DamP |
| 1775 | ribulose-phosphate 3-epimerase | |||
| 2255 | DUF2556 family protein | |||
| 2260 | M | M.Sensp14178ORF2230P (100% identity) | ATGCAT | M.Sen24392ORF2260P |
| 2265 | DNA-binding transcriptional regulator Fis | |||
| 3175 | DUF2732 family protein | |||
| 3180 | M | M.SensSZL38ORF19965P (100% identity) | M.Sen24392ORF3180P | |
| 3185 | replication endonuclease | |||
| 9035 | phosphohydrolase | |||
| 9040 | M | M.SenWC81DcmP (100% identity) | CCWGG | M.Sen24392DcmP |
| 9045 | V | V.StyUK1DcmP (100% identity) | V.Sen24392DcmP | |
| 9050 | drug/metabolite exporter YedA | |||
| 20285 | YebC/PmpR family DNA-binding transcriptional | |||
| 20290 | R | SenT075BORF19820P (100% identity) | Sen24392ORF20290P | |
| 20295 | IS3 family transposase | |||
| 20310 | conjugal transfer protein TraD | |||
| 20315 | R | SenT075BORF19850P (100% identity) | Sen24392ORF20320P | |
| 20320 | M | M.SenT075BORF19850P (100% identity) | M.Sen24392ORF20320P | |
| 20325 | tyrosine-type recombinase/integrase | |||
| plasmid p24392 | ||||
| 24030 | 104 aa hypothetical protein | |||
| 24035 | M | M.SspPIBORF23080P (100% identity) | M.Sen24392ORF24035P | |
| 24040 | 73 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 17885 | 33 aa hypothetical protein | |||
| 17890 | R | SenT075BORF17425P (100% identity) | CAGAG | Sen24392ORF17895P |
| 17895 | M | M.SenT075BORF17425P (100% identity) | CAGAG | M.Sen24392ORF17895P |
| 17900 | MFS transporter | |||