Salmonella enterica subsp. enterica serovar Agona CVM 28336 |
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Putative Salmonella enterica subsp. enterica serovar Agona CVM 28336 RM systems
Ref: Zhao,S. et al. Genes (Basel) 11 (9), E1025 (2020)
REBASE ref # 31880
| Sequence length: | GenBank #: | |
| Chromosome: | 4,933,457 bp | CP051356 |
| plasmid p28336: | 161,620 bp | CP051357 |
REBASE acronym: Sen28336
Org_num: 46880
All begin HFS76_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 20610 | Fic family protein | |||
| 20615 | R | SenSA5ORF17266P (100% identity) | CCCNNNNNRTAG | Sen28336ORF20625P |
| 20620 | S | S.SenSA4ORF5001P (100% identity) | CCCNNNNNRTAG | S.Sen28336ORF20625P |
| 20625 | M | M2.SenSA5ORF17266P (100% identity) | CCCNNNNNRTAG | M2.Sen28336ORF20625P |
| 20630 | M | M1.SenSA5ORF17266P (100% identity) | CCCNNNNNRTAG | M1.Sen28336ORF20625P |
| 20635 | toll/interleukin-1 receptor domain-containing | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1815 | cell division protein DamX | |||
| 1820 | M | M.StyTDamP (100% identity) | GATC | M.Sen28336DamP |
| 1825 | ribulose-phosphate 3-epimerase | |||
| 2310 | DUF2556 family protein | |||
| 2315 | M | M.StyUK1III (100% identity) | ATGCAT | M.Sen28336ORF2315P |
| 2320 | DNA-binding transcriptional regulator Fis | |||
| 3215 | DUF3850 domain-containing protein | |||
| 3220 | M | M.SenS1602ORF3445P (100% identity) | M.Sen28336ORF3220P | |
| 3225 | replication endonuclease | |||
| 5740 | TraR/DksA family transcriptional regulator | |||
| 5745 | M | M.SenS0722ORF17610P (100% identity) | GATC | M.Sen28336ORF5745P |
| 5750 | replication endonuclease | |||
| 14210 | drug/metabolite exporter YedA | |||
| 14215 | V | V.StyUK1DcmP (100% identity) | V.Sen28336DcmP | |
| 14220 | M | M.SenSA5DcmP (100% identity) | CCWGG | M.Sen28336DcmP |
| 14225 | phosphohydrolase | |||
| 15795 | NinE family protein | |||
| 15800 | M | M.Sen7563ORF16315P (100% identity) | M.Sen28336ORF15800P | |
| 15805 | recombination protein NinB | |||
| 15910 | ead/Ea22-like family protein | |||
| 15915 | M | M.Ssp15303ORFAP (100% identity) | M.Sen28336ORF15915P | |
| 15920 | Eaa protein | |||
| 18390 | NinE family protein | |||
| 18395 | M | M.Sens24230ORF16970P (100% identity) | GATC | M.Sen28336ORF18395P |
| 18400 | recombination protein NinB | |||
| 20595 | YebC/PmpR family DNA-binding transcriptional | |||
| 20600 | R | SenS12VPHORF11355P (100% identity) | Sen28336ORF20600P | |
| 20605 | fosfomycin resistance glutathione transferase | |||
| 20685 | DUF87 domain-containing protein | |||
| 20690 | M | M.SenSA2ORF2906P (92% identity) | CAGCTG | M.Sen28336ORF20690P |
| 20695 | 97 aa hypothetical protein | |||
| plasmid p28336 | ||||
| 24270 | 100 aa hypothetical protein | |||
| 24275 | M | M.YrupYR1ORFCP (100% identity) | M.Sen28336ORF24275P | |
| 24280 | 143 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 17965 | 33 aa hypothetical protein | |||
| 17970 | R | SenS12VPHORF9140P (100% identity) | CAGAG | Sen28336ORF17975P |
| 17975 | M | M.StyTORF2507P (100% identity) | CAGAG | M.Sen28336ORF17975P |
| 17980 | MFS transporter | |||