Salmonella enterica subsp. enterica serovar Anatum CVM 33822 |
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Putative Salmonella enterica subsp. enterica serovar Anatum CVM 33822 RM systems
Ref: Zhao,S. et al. Genes (Basel) 11 (9), E1025 (2020)
REBASE ref # 31880
| Sequence length: | GenBank #: | |
| Chromosome: | 4,833,900 bp | CP051342 |
| plasmid p33822-1: | 277,441 bp | CP051345 |
| plasmid p33822-2: | 101,468 bp | CP051343 |
REBASE acronym: Sen33822
Org_num: 46890
All begin HFT46_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 19835 | restriction endonuclease | |||
| 19840 | R | SenNCTR462ORF2380P (100% identity) | CCANNNNNNNNTGAG | Sen33822ORF19845P |
| 19845 | M | M.SenNCTR462ORF2380P (99% identity) | CCANNNNNNNNTGAG | M.Sen33822ORF19845P |
| 19850 | S | S.SenNCTR462ORF2380P (100% identity) | CCANNNNNNNNTGAG | S.Sen33822ORF19845P |
| 19855 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1785 | cell division protein DamX | |||
| 1790 | M | M.StyTDamP (100% identity) | GATC | M.Sen33822DamP |
| 1795 | ribulose-phosphate 3-epimerase | |||
| 2275 | DUF2556 family protein | |||
| 2280 | M | M.StyUK1III (100% identity) | ATGCAT | M.Sen33822ORF2280P |
| 2285 | DNA-binding transcriptional regulator Fis | |||
| 5465 | TraR/DksA family transcriptional regulator | |||
| 5470 | M | M.SenPP98ORF6030P (33% identity) | M.Sen33822ORF5470AP | |
| 5475 | IS5 family transposase | |||
| 5480 | M | M.SenPP98ORF6030P (63% identity) | M.Sen33822ORF5470BP | |
| 5485 | replication endonuclease | |||
| 5495 | 62 aa hypothetical protein | |||
| 5500 | M | M.SenSH7ORF6090P (100% identity) | CGGCCG | M.Sen33822ORF5500P |
| 5505 | R | SenS16ORF16875P (100% identity) | CGGCCG | Sen33822ORF5500P |
| 5510 | phage portal protein | |||
| 9135 | phosphohydrolase | |||
| 9140 | M | M.SenNCTR462DcmP (100% identity) | CCWGG | M.Sen33822DcmP |
| 9145 | V | V.StyUK1DcmP (100% identity) | V.Sen33822DcmP | |
| 9150 | drug/metabolite exporter YedA | |||
| 13225 | RusA family crossover junction | |||
| 13230 | M | M.SenS16ORF9325P (100% identity) | M.Sen33822ORF13230P | |
| 13235 | PerC family transcriptional regulator | |||
| 13290 | ATP-binding protein | |||
| 13295 | M | M.SenSH7ORF6615P (100% identity) | M.Sen33822ORF13295P | |
| 13300 | Eaa protein | |||
| 19975 | YebC/PmpR family DNA-binding transcriptional | |||
| 19980 | R | Sen76166ORF19310P (100% identity) | Sen33822ORF19980P | |
| 19985 | sce7725 family protein | |||
| 21445 | LexA family transcriptional regulator | |||
| 21450 | M | M.Sso90ORF15820P (100% identity) | GATC | M.Sen33822ORF21450P |
| 21455 | helix-turn-helix domain-containing protein | |||
| plasmid p33822-1 | ||||
| 24640 | 55 aa hypothetical protein | |||
| 24645 | M | M.Ssp15303DcmP (100% identity) | M.Sen33822Dcm2P | |
| 24650 | thermonuclease family protein | |||
| 25120 | 106 aa hypothetical protein | |||
| 25125 | M | M.SmapR478ORF272P (100% identity) | M.Sen33822ORF25125P | |
| 25130 | 202 aa hypothetical protein | |||
| 25250 | DNA-binding protein | |||
| 25255 | M | M.Ssp15303ORFEP (100% identity) | M.Sen33822ORF25255P | |
| 25260 | 284 aa hypothetical protein | |||
| plasmid p33822-2 | ||||
| 23945 | 73 aa hypothetical protein | |||
| 23950 | M | M.StyR64ORFAP (100% identity) | M.Sen33822ORF23950P | |
| 23955 | 103 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 17605 | 33 aa hypothetical protein | |||
| 17610 | R | SenNCTR462ORF9180P (99% identity) | CAGAG | Sen33822ORF17615P |
| 17615 | M | M.SenST224ORF2660P (100% identity) | CAGAG | M.Sen33822ORF17615P |
| 17620 | MFS transporter | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 19830 | BrnT family toxin | |||
| 19835 | R | SenNCTR462MrrP (100% identity) | Sen33822MrrP | |
| 19840 | type I restriction-modification system | |||