Salmonella enterica subsp. enterica serovar Newport CVM 34530 |
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Putative Salmonella enterica subsp. enterica serovar Newport CVM 34530 RM systems
Ref: Zhao,S. et al. Genes (Basel) 11 (9), E1025 (2020)
REBASE ref # 31880
| Sequence length: | GenBank #: | |
| Chromosome: | 4,862,977 bp | CP051317 |
| plasmid p34530-1: | 170,814 bp | CP051319 |
| plasmid p34530-2: | 105,973 bp | CP051318 |
REBASE acronym: Sen34530
Org_num: 46918
All begin HFT88_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 20175 | 322 aa hypothetical protein | |||
| 20180 | R | Spy5740IP (100% identity) | GACNNNNNNNRTCC | Sen34530ORF20185P |
| 20185 | M | M.SenS3ORF11567P (100% identity) | GACNNNNNNNRTCC | M.Sen34530ORF20185P |
| 20190 | S | S.SenS224ORF19910P (100% identity) | GACNNNNNNNRTCC | S.Sen34530ORF20185P |
| 20195 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1755 | cell division protein DamX | |||
| 1760 | M | M.StyTDamP (100% identity) | GATC | M.Sen34530DamP |
| 1765 | ribulose-phosphate 3-epimerase | |||
| 2245 | DUF2556 family protein | |||
| 2250 | M | M.StyUK1III (100% identity) | ATGCAT | M.Sen34530ORF2250P |
| 2255 | DNA-binding transcriptional regulator Fis | |||
| 3135 | DUF3850 domain-containing protein | |||
| 3140 | M | M.SenS2085ORF19550P (100% identity) | M.Sen34530ORF3140P | |
| 3145 | replication endonuclease | |||
| 9245 | phosphohydrolase | |||
| 9250 | M | M.Sens29927DcmP (100% identity) | CCWGG | M.Sen34530DcmP |
| 9255 | V | V.StyTDcmP (100% identity) | V.Sen34530DcmP | |
| 9260 | drug/metabolite exporter YedA | |||
| 14100 | methyltransferase | |||
| 14105 | M | M.Sens29945ORF7970P (100% identity) | M.Sen34530ORF14105P | |
| 14110 | 82 aa hypothetical protein | |||
| 20315 | YebC/PmpR family DNA-binding transcriptional | |||
| 20320 | R | SenS224ORF20045P (100% identity) | Sen34530ORF20320P | |
| 20325 | DNA primase | |||
| plasmid p34530-1 | ||||
| 24490 | 100 aa hypothetical protein | |||
| 24495 | M | M.YrupYR1ORFCP (100% identity) | M.Sen34530ORF24495P | |
| 24500 | 143 aa hypothetical protein | |||
| plasmid p34530-2 | ||||
| 24160 | 103 aa hypothetical protein | |||
| 24165 | M | M.Sso3794ORF26595P (100% identity) | SAY | M.Sen34530ORF24165P |
| 24170 | 73 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 17970 | 33 aa hypothetical protein | |||
| 17975 | R | Ssp6947IIP (100% identity) | CAGAG | Sen34530ORF17980P |
| 17980 | M | M.SenZYXORFDP (100% identity) | CAGAG | M.Sen34530ORF17980P |
| 17985 | MFS transporter | |||