Salmonella enterica subsp. enterica serovar Heidelberg CVM 35161 |
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Putative Salmonella enterica subsp. enterica serovar Heidelberg CVM 35161 RM systems
Ref: Zhao,S. et al. Genes (Basel) 11 (9), E1025 (2020)
REBASE ref # 31880
| Sequence length: | GenBank #: | |
| Chromosome: | 4,856,293 bp | CP051310 |
| plasmid p35161-1: | 239,428 bp | CP051311 |
| plasmid p35161-2: | 101,468 bp | CP051312 |
REBASE acronym: Sen35161
Org_num: 46904
All begin HFU19_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 20130 | restriction endonuclease | |||
| 20135 | R | StyUK1IIP (100% identity) | GAGNNNNNNRTAYG | Sen35161ORF20140P |
| 20140 | M | M.Sens12373ORF19415P (100% identity) | GAGNNNNNNRTAYG | M.Sen35161ORF20140P |
| 20145 | S | S.StyUK1II (100% identity) | GAGNNNNNNRTAYG | S.Sen35161ORF20140P |
| 20150 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1875 | cell division protein DamX | |||
| 1880 | M | M.StyTDamP (100% identity) | GATC | M.Sen35161DamP |
| 1885 | ribulose-phosphate 3-epimerase | |||
| 2365 | DUF2556 family protein | |||
| 2370 | M | M.StyUK1III (100% identity) | ATGCAT | M.Sen35161ORF2370P |
| 2375 | DNA-binding transcriptional regulator Fis | |||
| 3260 | DUF3850 domain-containing protein | |||
| 3265 | M | M.SenS2085ORF19550P (100% identity) | M.Sen35161ORF3265P | |
| 3270 | replication endonuclease | |||
| 9405 | phosphohydrolase | |||
| 9410 | M | M.SenZ223DcmP (100% identity) | CCWGG | M.Sen35161DcmP |
| 9415 | V | V.StyTDcmP (100% identity) | V.Sen35161DcmP | |
| 9420 | drug/metabolite exporter YedA | |||
| 14485 | YqaJ viral recombinase family protein | |||
| ??? | M | M.SenS321ORF16155P (100% identity) | GATC | M.Sen35161ORF14490P |
| 14495 | DUF4060 family protein | |||
| 20270 | YebC/PmpR family DNA-binding transcriptional | |||
| 20275 | R | Sens12373ORF19550P (100% identity) | Sen35161ORF20275P | |
| 20280 | FosA family fosfomycin resistance glutathione | |||
| 20320 | RM | Sens12373ORF19575P (100% identity) | GATCAG | Sen35161ORF20320P |
| 20325 | DEAD/DEAH box helicase | |||
| plasmid p35161-1 | ||||
| 23975 | thermonuclease family protein | |||
| 23980 | M | M.YpsF1ORFCP (46% identity) | M.Sen35161ORF23980AP | |
| 23985 | IS66-like element ISEc8 family transposase | |||
| 23990 | IS66 family insertion sequence element accessory | |||
| 23995 | IS66 family insertion sequence hypothetical | |||
| 24000 | M | M.YpsF1ORFCP (54% identity) | M.Sen35161ORF23980BP | |
| 24005 | 55 aa hypothetical protein | |||
| 24710 | 277 aa hypothetical protein | |||
| 24715 | M | M.YpsF1ORFDP (100% identity) | M.Sen35161ORF24715P | |
| 24720 | DNA-binding protein | |||
| plasmid p35161-2 | ||||
| 25260 | 103 aa hypothetical protein | |||
| 25265 | M | M.StyR64ORFAP (100% identity) | M.Sen35161ORF25265P | |
| 25270 | 73 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 17555 | 33 aa hypothetical protein | |||
| 17560 | R | Sens12373ORF17180P (100% identity) | CAGAG | Sen35161ORF17565P |
| 17565 | M | M.SenZ223ORF2150P (100% identity) | CAGAG | M.Sen35161ORF17565P |
| 17570 | MFS transporter | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 20125 | BrnT family toxin | |||
| 20130 | R | StyUK1MrrP (100% identity) | Sen35161MrrP | |
| 20135 | type I restriction-modification system | |||