Salmonella enterica subsp. enterica serovar Reading CVM 35189 |
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Putative Salmonella enterica subsp. enterica serovar Reading CVM 35189 RM systems
Ref: Zhao,S. et al. Genes (Basel) 11 (9), E1025 (2020)
REBASE ref # 31880
| Sequence length: | GenBank #: | |
| Chromosome: | 4,881,835 bp | CP051307 |
| plasmid p35189-1: | 154,276 bp | CP051308 |
REBASE acronym: Sen35189
Org_num: 46922
All begin HFU35_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 11305 | endoribonuclease SymE | |||
| 11310 | S | S.Sens29868ORF20005P (100% identity) | GAGNNNNNNRTAYG | S.Sen35189ORF11315P |
| 11315 | M | M.StyLTIII (100% identity) | GAGNNNNNNRTAYG | M.Sen35189ORF11315P |
| 11320 | R | StyUK1IIP (100% identity) | GAGNNNNNNRTAYG | Sen35189ORF11315P |
| 11325 | restriction endonuclease | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1810 | cell division protein DamX | |||
| 1815 | M | M.StyTDamP (100% identity) | GATC | M.Sen35189DamP |
| 1820 | ribulose-phosphate 3-epimerase | |||
| 2300 | DUF2556 family protein | |||
| 2305 | M | M.StyUK1III (100% identity) | ATGCAT | M.Sen35189ORF2305P |
| 2310 | DNA-binding transcriptional regulator Fis | |||
| 6320 | 59 aa hypothetical protein | |||
| 6325 | M | M.Sph9TCWORF31P (100% identity) | M.Sen35189ORF6325P | |
| 6330 | DGQHR domain-containing protein | |||
| 9635 | helix-turn-helix domain-containing protein | |||
| 9640 | M | M.Sso90ORF15820P (100% identity) | GATC | M.Sen35189ORF9640P |
| 9645 | LexA family transcriptional regulator | |||
| 11150 | DEAD/DEAH box helicase | |||
| 11155 | RM | Sens29868ORF20165P (100% identity) | Sen35189ORF11155P | |
| 11175 | fosfomycin resistance glutathione transferase | |||
| 11180 | R | Sens29868ORF20140P (100% identity) | Sen35189ORF11180P | |
| 11185 | YebC/PmpR family DNA-binding transcriptional | |||
| 16615 | DUF4060 family protein | |||
| 16620 | M | M.SspsA7ORF8410P (100% identity) | GATC | M.Sen35189ORF16620P |
| 16625 | YqaJ viral recombinase family protein | |||
| 21700 | drug/metabolite exporter YedA | |||
| 21705 | V | V.StyUK1DcmP (100% identity) | V.Sen35189DcmP | |
| 21710 | M | M.Sens29868DcmP (100% identity) | CCWGG | M.Sen35189DcmP |
| 21715 | phosphohydrolase | |||
| plasmid p35189-1 | ||||
| 24700 | 100 aa hypothetical protein | |||
| 24705 | M | M.YrupYR1ORFCP (100% identity) | M.Sen35189ORF24705P | |
| 24710 | 143 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 13545 | MFS transporter | |||
| 13550 | M | M.StyTORF2507P (100% identity) | CAGAG | M.Sen35189ORF13550P |
| 13555 | R | Sens29868ORF17775P (100% identity) | CAGAG | Sen35189ORF13550P |
| 13560 | 33 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 11320 | type I restriction-modification system | |||
| 11325 | R | StyUK1MrrP (100% identity) | Sen35189MrrP | |
| 11330 | BrnT family toxin | |||