Mycoplasma bovis VK11 |
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Putative Mycoplasma bovis VK11 RM systems
Ref: Bokma,J. et al. Vet Res 51 (1), 121 (2020)
REBASE ref # 32174
Complete sequence: 977,451 bp
GenBank #: CP058479
REBASE acronym: MboVK11
Org_num: 48489
All begin HYD86_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 1170 | 60 aa hypothetical protein | |||
| 1175 | M | M.Mbo158ORF985P (96% identity) | M.MboVK11ORF1175P | |
| ??? | S | S1.Mbos172ORF1010P (55% identity) | S1.MboVK11ORF1175P | |
| 1180 | R | Mbos193ORF1135P (100% identity) | MboVK11ORF1175P | |
| 1185 | site-specific integrase | |||
| 1190 | S | S2.MboC83ORF2720P (58% identity) | S2.MboVK11ORF1175P | |
| 1195 | IS3 family transposase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1795 | DNA polymerase III subunit delta | |||
| 1800 | M | M.MboVK27ORF1690P (100% identity) | CTAG | M.MboVK11ORF1800P |
| 1805 | R | MbosMb1ORF1625P (100% identity) | CTAG | MboVK11ORF1800P |
| 1810 | DUF285 domain-containing protein | |||
| 2270 | 150 aa hypothetical protein | |||
| 2275 | M | M.Mbos183ORF2155P (99% identity) | M.MboVK11ORF2275P | |
| 2280 | excinuclease ABC subunit UvrB | |||
| 2705 | 30S ribosomal protein S2 | |||
| 2710 | M | M.Mbo200ORF2585P (98% identity) | M.MboVK11ORF2710P | |
| 2715 | variable surface lipoprotein | |||
| 3195 | 65 aa hypothetical protein | |||
| 3200 | M | M.Mbo276ORF3185P (100% identity) | M.MboVK11ORF3200P | |
| 3205 | ribonuclease HIII | |||
| 3465 | AAA family ATPase | |||
| ??? | R | Mbo231ORF3290P (92% identity) | MboVK11ORF3485P | |
| 3485 | M | M1.Mbos184ORF3435P (100% identity) | GCATC | M1.MboVK11ORF3485P |
| 3490 | M | M2.MbosMb1ORF3285P (100% identity) | GCATC | M2.MboVK11ORF3485P |
| 3495 | 30S ribosomal protein S16 | |||
| 3690 | YigZ family protein | |||
| 3700 | R | R2.MboVK6ORF3530P (96% identity) | GANTC | R2.MboVK11ORF3705P |
| 3705 | M | M.MboVK15ORF3595P (100% identity) | GANTC | M.MboVK11ORF3705P |
| 3710 | MFS transporter | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 810 | IS30 family transposase | |||
| 815 | R | Mbos193ORF800P (100% identity) | MboVK11ORF820P | |
| 820 | M | M1.Mbo252ORF785P (99% identity) | M1.MboVK11ORF820P | |
| ??? | M | M2.Mbos193ORF800P (100% identity) | M2.MboVK11ORF820P | |
| ??? | M | M3.Mbo237ORF785P (99% identity) | M3.MboVK11ORF820P | |
| 850 | trigger factor | |||