Escherichia coli 1EC187 |
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Putative Escherichia coli 1EC187 RM systems
Ref: Prah,I. and Saito,R. unpublished
REBASE ref # 31805
| Sequence length: | GenBank #: | |
| Chromosome: | 4,847,148 bp | CP061108 |
| plasmid pEC187_1: | 112,598 bp | CP061109 |
REBASE acronym: EcoC187
Org_num: 46502
All begin IBZ91_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 5690 | IS1 family transposase | |||
| 5695 | R | Sen12509ORF5865P (100% identity) | ACAYNNNNCTG | EcoC187ORF5705P |
| 5700 | S | S.Sen12509ORF5865P (100% identity) | ACAYNNNNCTG | S.EcoC187ORF5705P |
| ??? | M | M.EcoVL02ORF7370P (100% identity) | ACAYNNNNCTG | M.EcoC187ORF5705P |
| 5710 | transposase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1830 | cell division protein DamX | |||
| 1835 | M | M.UbaC1152DamP (100% identity) | GATC | M.EcoC187DamP |
| 1840 | ribulose-phosphate 3-epimerase | |||
| 2455 | DUF2556 family protein | |||
| 2460 | M | M.Ssp28760ORF20045P (100% identity) | ATGCAT | M.EcoC187ORF2460P |
| 2465 | DNA-binding transcriptional regulator Fis | |||
| 9340 | phosphohydrolase | |||
| 9345 | M | M.SflSTLE1DcmP (100% identity) | CCWGG | M.EcoC187DcmP |
| 9350 | V | V.SsoSE61DcmP (100% identity) | V.EcoC187DcmP | |
| 9355 | drug/metabolite exporter YedA | |||
| 20620 | 527 aa hypothetical protein | |||
| 20625 | R | EcosS3ORF15775P (100% identity) | EcoC187ORF20630P | |
| 20630 | M | M.EcosS3ORF15775P (100% identity) | M.EcoC187ORF20630P | |
| 20635 | conjugal transfer protein TraG N-terminal | |||
| 21180 | phage lysis protein EssD | |||
| 21185 | M | M.Sso63633ORF22290P (100% identity) | M.EcoC187ORF21185P | |
| 21190 | TrmB family transcriptional regulator | |||
| plasmid pEC187_1 | ||||
| 23580 | 73 aa hypothetical protein | |||
| 23585 | M | M.UbapRSB107ORFAP (100% identity) | SAY | M.EcoC187ORF23585P |
| 23590 | 102 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 13280 | isocitrate dehydrogenase | |||
| 13285 | R | EcosEC27McrCP (100% identity) | EcoC187McrCP | |
| 13290 | R | EcoteDMcrBP (100% identity) | EcoC187McrBP | |
| 13295 | recombinase family protein | |||
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 14835 | replication endonuclease | |||
| 14840 | M | M.Sen663ORF16605P (100% identity) | GATC | M.EcoC187ORF14840P |
| 14845 | TraR/DksA family transcriptional regulator | |||