Histophilus somni ASc-MMNZ-VFA-69 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Histophilus somni ASc-MMNZ-VFA-69 RM systems
Ref: Schryvers,A. et al. unpublished
REBASE ref # 32014
Complete sequence: 2,183,367 bp
GenBank #: CP066564
REBASE acronym: Hso69
Org_num: 47829
All begin JFL55_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 4815 | DMT family transporter | |||
| 4820 | M | M.HsoMASF01ORF5515P (97% identity) | CYYANNNNNNCTC | M.Hso69ORF4820P |
| 4825 | Fic family protein | |||
| 4830 | S | S.HsoMASF01ORF5515P (100% identity) | CYYANNNNNNCTC | S.Hso69ORF4820P |
| 4835 | 174 aa hypothetical protein | |||
| 4840 | R | HsoMASF01ORF5515P (99% identity) | CYYANNNNNNCTC | Hso69ORF4820P |
| 4845 | exodeoxyribonuclease I | |||
| 6230 | phosphopyruvate hydratase | |||
| 6235 | S | S3.Hso69ORF4105P (100% identity) | S1.Hso69ORF6235P | |
| 6240 | R | HsoORF1619P (100% identity) | Hso69ORF6235P | |
| 6245 | Abi family protein | |||
| 6250 | S | S2.HsoF07ORF4060P (98% identity) | S2.Hso69ORF6235P | |
| 6255 | site-specific integrase | |||
| 6260 | S | S1.HsoF09ORF4065P (99% identity) | AACNNNNNGTT | S3.Hso69ORF6235P |
| 6265 | CTP synthetase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 875 | D-glycero-beta-D-manno-heptose 1,7-bisphosphate | |||
| 880 | S | S.Hso76ORF865P (98% identity) | S.Hso69ORF885P | |
| 885 | RM | HsoORF574P (100% identity) | CGANNNNNRTAY | Hso69ORF885P |
| 890 | glycerate kinase | |||
| 2240 | Arm DNA-binding domain-containing protein | |||
| 2245 | C | C.HsoMASF01ORF8025P (100% identity) | C.Hso69ORF8080P | |
| 2250 | M | M.Hso76ORF2200P (100% identity) | M.Hso69ORF8080P | |
| 2255 | R | HsoKLM014ORF8080P (100% identity) | Hso69ORF8080P | |
| 2260 | V | V.HsoMASF01ORF8025P (100% identity) | V.Hso69ORF8080P | |
| 2265 | DUF4868 domain-containing protein | |||
| 2605 | TdeIII family type II restriction endonuclease | |||
| 2610 | M | M.HsoF09ORF7580P (100% identity) | GAWTC | M.Hso69ORF2610P |
| 2615 | valine--tRNA ligase | |||
| 3570 | UTP--glucose-1-phosphate uridylyltransferase | |||
| 3575 | M | M.HsoORF1064P (100% identity) | GATC | M.Hso69ORF3575P |
| 3580 | 3-dehydroquinate synthase | |||
| 8295 | DUF1367 family protein | |||
| 8300 | M | M.Hso69ORF2060P (93% identity) | M.Hso69ORF8300P | |
| 8305 | replication protein P | |||
| 8430 | polymer-forming cytoskeletal protein | |||
| 8435 | M | M.Hso74ORF1950P (96% identity) | M.Hso69ORF8435P | |
| 8440 | 249 aa hypothetical protein | |||