Histophilus somni ASc-MMNZ-VFA-071 |
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Putative Histophilus somni ASc-MMNZ-VFA-071 RM systems
Ref: Schryvers,A. et al. unpublished
REBASE ref # 32014
Complete sequence: 2,183,511 bp
GenBank #: CP066559
REBASE acronym: Hso71
Org_num: 47831
All begin JFL50_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 4095 | CTP synthetase | |||
| 4100 | S | S1.HsoMASF01ORF4110P (88% identity) | S.Hso71ORF4100P | |
| 4105 | site-specific integrase | |||
| 4105 | site-specific integrase | |||
| 4110 | S | S2.HsoF04ORF4115P (97% identity) | S1.Hso71ORF4110P | |
| 4115 | Abi family protein | |||
| 4120 | R | HsoMASF01ORF4110P (100% identity) | Hso71ORF4110P | |
| 4125 | S | S2.HsoKLM014ORF4145P (100% identity) | S2.Hso71ORF4110P | |
| 4130 | phosphopyruvate hydratase | |||
| 5515 | exodeoxyribonuclease I | |||
| 5520 | R | HsoMASF01ORF5515P (100% identity) | CYYANNNNNNCTC | Hso71ORF5540P |
| 5525 | 174 aa hypothetical protein | |||
| 5530 | S | S.HsoMASF01ORF5515P (99% identity) | CYYANNNNNNCTC | S.Hso71ORF5540P |
| 5535 | Fic family protein | |||
| 5540 | M | M.HsoMASF01ORF5515P (100% identity) | CYYANNNNNNCTC | M.Hso71ORF5540P |
| 5545 | DMT family transporter | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1905 | 264 aa hypothetical protein | |||
| 1910 | M | M.HsoF04ORF1905P (96% identity) | M.Hso71ORF1910P | |
| 1915 | polymer-forming cytoskeletal protein | |||
| 2040 | replication protein P | |||
| 2045 | M | M.Hso69ORF2060P (96% identity) | M.Hso71ORF2045P | |
| 2050 | DUF1367 family protein | |||
| 7715 | valine--tRNA ligase | |||
| 7720 | M | M.HsoF03ORF7685P (98% identity) | GAWTC | M.Hso71ORF7720P |
| 7725 | TdeIII family type II restriction endonuclease | |||
| 8065 | DUF4868 domain-containing protein | |||
| 8070 | V | V.HsoMASF01ORF8025P (100% identity) | V.Hso71ORF8080P | |
| 8075 | R | HsoKLM014ORF8080P (100% identity) | Hso71ORF8080P | |
| 8080 | M | M.Hso76ORF2200P (100% identity) | M.Hso71ORF8080P | |
| 8085 | C | C.HsoMASF01ORF8025P (100% identity) | C.Hso71ORF8080P | |
| 8090 | Arm DNA-binding domain-containing protein | |||
| 8560 | restriction endonuclease subunit S | |||
| 8565 | RM | HsoMASF01ORF8480AP (100% identity) | AACNNNNNGTT | Hso71ORF8565P |
| 8570 | HrgA protein | |||
| 9425 | glycerate kinase | |||
| 9430 | RM | HsoMASF01ORF9350P (100% identity) | CGANNNNNRTAY | Hso71ORF9430P |
| ??? | S | S.HsoF09ORF9270P (28% identity) | S1.Hso71ORF9430P | |
| 9435 | S | S2.HsoMASF01ORF9350P (97% identity) | S2.Hso71ORF9430P | |
| 9440 | D-glycero-beta-D-manno-heptose 1,7-bisphosphate | |||
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 6755 | 3-dehydroquinate synthase | |||
| 6760 | M | M.HsoMASF01ORF6725P (100% identity) | GATC | M.Hso71ORF6760P |
| 6765 | UTP--glucose-1-phosphate uridylyltransferase | |||