Vibrio parahaemolyticus 81TDH2 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Vibrio parahaemolyticus 81TDH2 RM systems
Ref: Prithvisagar,K.S. et al. unpublished
REBASE ref # 32504
| Sequence length: | GenBank #: | |
| chromosome 1: | 3,083,194 bp | CP066244 |
| chromosome 2: | 1,796,785 bp | CP066245 |
REBASE acronym: VpaTDH2
Org_num: 49803
All begin JCT83_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| chromosome 1 | ||||
| 4085 | 217 aa hypothetical protein | |||
| 4090 | S | S.MmosGN28ORF260P (71% identity) | S.VpaTDH2ORF4095P | |
| 4095 | M | M.VnaPWH3aORF4550P (99% identity) | M.VpaTDH2ORF4095P | |
| 4100 | 132 aa hypothetical protein | |||
| 4105 | 49 aa hypothetical protein | |||
| 4110 | elongation factor Ts | |||
| 4115 | multidrug transporter | |||
| 4120 | 428 aa hypothetical protein | |||
| 4125 | R | Vpa114ORF9840P (97% identity) | VpaTDH2ORF4095P | |
| 4130 | helix-turn-helix transcriptional regulator | |||
| chromosome 2 | ||||
| 16070 | 114 aa hypothetical protein | |||
| 16075 | M | M.VtuFP17ORF1370P (96% identity) | M.VpaTDH2ORF16075P | |
| 16080 | S | S.SprTGB10ORF11455P (57% identity) | S.VpaTDH2ORF16075P | |
| 16085 | 434 aa hypothetical protein | |||
| 16090 | R | VcaBoB53ORF13315P (97% identity) | VpaTDH2ORF16075P | |
| 16095 | 346 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| chromosome 1 | ||||
| 12540 | ribulose-phosphate 3-epimerase | |||
| 12545 | M | M.VpaV493DamP (100% identity) | GATC | M.VpaTDH2DamP |
| 12550 | AAA family ATPase | |||
| chromosome 2 | ||||
| 18785 | 369 aa hypothetical protein | |||
| 18790 | M | M.Val1102ORFCP (91% identity) | M.VpaTDH2ORF18790P | |
| 18795 | tyrosine-type recombinase/integrase | |||