Treponema species RCC2812 |
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Putative Treponema species RCC2812 RM systems
Ref: Belkhou,C. and Raes,J. unpublished
REBASE ref # 32489
Complete sequence: 2,738,066 bp
GenBank #: CP064936
REBASE acronym: TspC2812
Org_num: 49770
All begin IWA51_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 650 | DUF4143 domain-containing protein | |||
| 655 | S | S1.TspC2812ORF10900P (50% identity) | S.TspC2812ORF670P | |
| 660 | winged helix-turn-helix transcriptional | |||
| 665 | cell filamentation protein Fic | |||
| 670 | M | M.TspC2812ORF10900P (96% identity) | M.TspC2812ORF670P | |
| 675 | 138 aa hypothetical protein | |||
| 710 | ATP-binding protein | |||
| 715 | S | S2.PmeBin220ORFAP (40% identity) | S.TspC2812ORF715P | |
| 720 | 314 aa hypothetical protein | |||
| 980 | toxin-antitoxin system toxin component, | |||
| 985 | R | PmeBin16ORFEP (69% identity) | TspC2812ORF990P | |
| 990 | M | M.Gme92ORFI5P (66% identity) | M.TspC2812ORF990P | |
| 995 | S | S.Rho2517ORFCP (46% identity) | S1.TspC2812ORF990P | |
| 1000 | S | S.Msp3344ORFCP (38% identity) | S2.TspC2812ORF990P | |
| 1005 | 60 aa hypothetical protein | |||
| 1185 | 77 aa hypothetical protein | |||
| 1190 | M | M.OspMM35ORF11120P (67% identity) | M.TspC2812ORF1190P | |
| 1195 | DNA binding domain-containing protein | |||
| 1200 | S | S.PmeBin11ORFDP (69% identity) | S.TspC2812ORF1190P | |
| 1205 | R | Pbr921IP (57% identity) | TspC2812ORF1190P | |
| 1210 | substrate-binding domain-containing protein | |||
| 8135 | helix-turn-helix transcriptional regulator | |||
| 8140 | M | M.Gsp1144I (94% identity) | M.TspC2812ORF8140P | |
| 8145 | virulence RhuM family protein | |||
| 8150 | 263 aa hypothetical protein | |||
| 8155 | S | S.PmeBin370ORFBP (48% identity) | S1.TspC2812ORF8140P | |
| 8160 | S | S1.Pba22567ORF785P (81% identity) | S2.TspC2812ORF8140P | |
| 8165 | R | ObaE38ORF4650P (92% identity) | TspC2812ORF8140P | |
| 8170 | abortive infection family protein | |||
| 10895 | adenosine deaminase | |||
| 10900 | M | M.TreCHPAORF11820P (96% identity) | M.TspC2812ORF10900P | |
| 10905 | cell filamentation protein Fic | |||
| 10910 | DNA binding domain-containing protein | |||
| 10915 | S | S.TspC2812ORF670P (50% identity) | S1.TspC2812ORF10900P | |
| 10920 | DUF2442 domain-containing protein | |||
| 10925 | DUF4160 domain-containing protein | |||
| 10930 | tyrosine-type recombinase/integrase | |||
| 10935 | S | S1.TspC2812ORF10900P (46% identity) | S2.TspC2812ORF10900P | |
| 10940 | R | TreCHPAORF11820P (77% identity) | TspC2812ORF10900P | |
| 10945 | 166 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 230 | YcgN family cysteine cluster protein | |||
| 235 | M | M.TunA1ORF1590P (50% identity) | M.TspC2812ORF235P | |
| 240 | R | TunA1ORF1590P (59% identity) | TspC2812ORF235P | |
| 245 | type III toxin-antitoxin system ToxN/AbiQ family | |||
| 1940 | 99 aa hypothetical protein | |||
| 1945 | M | M.Tsu2489ORF110P (68% identity) | M.TspC2812ORF1945P | |
| 1950 | ATP-binding protein | |||
| 4115 | AIPR family protein | |||
| 4120 | M | M.Pjo18315ORF7845P (43% identity) | M.TspC2812ORF4120P | |
| 4125 | 267 aa hypothetical protein | |||
| 4755 | DUF3276 family protein | |||
| 4760 | M | M.Tsu2489V (71% identity) | M.TspC2812ORF4760P | |
| 4765 | cysteine desulfurase | |||
| 10955 | 158 aa hypothetical protein | |||
| 10960 | M | M.TreCHPAORF10480P (64% identity) | M.TspC2812ORF10960P | |
| 10965 | 335 aa hypothetical protein | |||
| 11460 | 130 aa hypothetical protein | |||
| 11465 | RM | DspHDW5BORF5340P (3% identity) | TspC2812ORF11465AP | |
| 11470 | IS256 family transposase | |||
| 11475 | RM | CchORF378BP (35% identity) | TspC2812ORF11465BP | |
| 11480 | phospholipase D family protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 10365 | 523 aa hypothetical protein | |||
| 10370 | M | M.Tsu2489ORF1195P (95% identity) | M.TspC2812ORF10370P | |
| 10375 | 587 aa hypothetical protein | |||
| 10380 | virulence RhuM family protein | |||
| 10385 | R | Tsu2489ORF1195P (96% identity) | TspC2812ORF10370P | |
| 10390 | DUF262 domain-containing protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1050 | IS256 family transposase | |||
| 1055 | R | Tsp788McrCP (37% identity) | TspC2812McrCP | |
| 1060 | R | PspHUN102McrBP (24% identity) | TspC2812McrBP | |
| 1065 | arylesterase | |||
| 1815 | LysR family transcriptional regulator | |||
| ??? | R | EspLV19ORF10195P (31% identity) | TspC2812ORF1820AP | |
| 1830 | IS256 family transposase | |||
| 1835 | R | MsmAORF690P (8% identity) | TspC2812ORF1820BP | |
| 1840 | (deoxy)nucleoside triphosphate | |||