Lactococcus lactis subsp. cremoris EPSC |
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Putative Lactococcus lactis subsp. cremoris EPSC RM systems
Ref: Kita,K. and Ishikawa,S. unpublished
REBASE ref # 32108
| Sequence length: | GenBank #: | |
| Chromosome: | 2,401,002 bp | AP024222 |
| plasmid pEPSC2: | 61,301 bp | AP024224 |
| plasmid pEPSC5: | 29,033 bp | AP024227 |
| plasmid pEPSC6: | 16,682 bp | AP024228 |
REBASE acronym: LlaEPSC
Org_num: 48115
All begin LLC_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 820 | 197 aa hypothetical protein | |||
| 830 | R | LlaG32ORF5830P (100% identity) | LlaEPSCORF890P | |
| 840 | IS982 family transposase | |||
| 850 | S | S1.LlaJM4oldORF1151P (100% identity) | S2.LlaEPSCORF890P | |
| 860 | transposase | |||
| 870 | transposase | |||
| 880 | S | S1.LlaG32ORF5830P (100% identity) | S1.LlaEPSCORF890P | |
| 890 | M | M.LlaJM4FORFDP (100% identity) | M.LlaEPSCORF890P | |
| 900 | DNA gyrase subunit A | |||
| plasmid pEPSC5 | ||||
| 28090 | 250 aa hypothetical protein | |||
| 28100 | R | LlaG32ORFAP (100% identity) | LlaEPSCORF28110P | |
| 28110 | M | M.LlaG32ORFAP (98% identity) | M.LlaEPSCORF28110P | |
| 28120 | S | S.LlaG32ORFAP (100% identity) | S.LlaEPSCORF28110P | |
| 28130 | 376 aa hypothetical protein | |||
| plasmid pEPSC6 | ||||
| 28360 | 376 aa hypothetical protein | |||
| ??? | S | S.LlaG32ORFAP (100% identity) | S.LlaEPSCORF28110P | |
| 28210 | M | M.LlaG32ORFAP (98% identity) | M.LlaEPSCORF28110P | |
| 28220 | deoxyribonuclease | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 3970 | crossover junction endodeoxyribonuclease RuvA | |||
| 3980 | M | M.LlaLD61ORF13860P (100% identity) | M.LlaEPSCORF3980P | |
| 3990 | 73 aa hypothetical protein | |||
| 6790 | crossover junction endodeoxyribonuclease RuvA | |||
| 6800 | M | M.LlaLD61ORF13860P (100% identity) | M.LlaEPSCORF6800P | |
| 6810 | 241 aa hypothetical protein | |||
| plasmid pEPSC2 | ||||
| 26610 | 744 aa hypothetical protein | |||
| 26620 | M | M.LlaG32ORF26720P (100% identity) | M.LlaEPSCORF26620P | |
| 26630 | R | LlaG32ORF26720P (100% identity) | LlaEPSCORF26620P | |
| 26640 | recombinase family protein | |||