Edwardsiella ictaluri 2234 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Edwardsiella ictaluri 2234 RM systems
Ref: Machimbirike,V.I. et al. unpublished
REBASE ref # 31948
| Sequence length: | GenBank #: | |
| Chromosome: | 3,705,319 bp | CP053781 |
| plasmid pEI-2234-3: | 109,462 bp | CP053782 |
REBASE acronym: Eic2234
Org_num: 47233
All begin F8538_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 165 | 194 aa hypothetical protein | |||
| 170 | R | Eic1ORF11370P (100% identity) | Eic2234ORF175P | |
| 175 | M | M.Eic1ORF11370P (100% identity) | M.Eic2234ORF175P | |
| 180 | S | S.Eic1ORF11370P (80% identity) | S.Eic2234ORF175P | |
| 185 | IS256-like element ISEic2 family transposase | |||
| 2110 | 144 aa hypothetical protein | |||
| 2115 | M | M.Eic1ORF13320P (100% identity) | M.Eic2234ORF2115P | |
| 2120 | S | S.Eic1ORF13320P (100% identity) | S.Eic2234ORF2115P | |
| 2125 | R | Eic1ORF13320P (100% identity) | Eic2234ORF2115P | |
| 2135 | G/U mismatch-specific DNA glycosylase | |||
| 4255 | transposase | |||
| 4260 | M | M.Eic1ORF15485P (100% identity) | M.Eic2234ORF4260P | |
| 4265 | S | S.Eic1ORF15485P (100% identity) | S.Eic2234ORF4260P | |
| 4270 | R | Eic1ORF15485P (100% identity) | Eic2234ORF4260P | |
| 4275 | AAA domain-containing protein | |||
| 9655 | M48 family metallopeptidase | |||
| 9660 | R | Eic1ORF3730P (100% identity) | Eic2234ORF9680P | |
| 9665 | DUF262 domain-containing protein | |||
| 9670 | DUF262 domain-containing protein | |||
| 9675 | S | S.Eic1ORF3730P (100% identity) | S.Eic2234ORF9680P | |
| 9680 | M | M.Eic1ORF3730P (100% identity) | M.Eic2234ORF9680P | |
| 9685 | DUF2787 domain-containing protein | |||
| 10575 | transposase | |||
| 10580 | R | Eic1ORF4645P (100% identity) | CAYNNNNNNCCTC | Eic2234ORF10595P |
| 10585 | Fic family protein | |||
| 10590 | S | S.Eic1ORF4645P (100% identity) | CAYNNNNNNCCTC | S.Eic2234ORF10595P |
| 10595 | M | M.Eic1ORF4645P (100% identity) | CAYNNNNNNCCTC | M.Eic2234ORF10595P |
| 10600 | low-specificity L-threonine aldolase | |||
| 13145 | DUF262 domain-containing protein | |||
| 13150 | S | S.Eic1ORF7255P (100% identity) | S.Eic2234ORF13155P | |
| 13155 | M | M.Eic1ORF7255P (100% identity) | M.Eic2234ORF13155P | |
| 13160 | R | Eic1ORF7255P (100% identity) | Eic2234ORF13155P | |
| 13165 | 98 aa hypothetical protein | |||
| 14180 | AlpA family transcriptional regulator | |||
| 14185 | M | M.Eic1ORF8305P (100% identity) | M.Eic2234ORF14185P | |
| 14190 | S | S.Eic1ORF8305P (100% identity) | S.Eic2234ORF14185P | |
| 14195 | AAA family ATPase | |||
| 14200 | IS256-like element ISEic2 family transposase | |||
| 14205 | 122 aa hypothetical protein | |||
| 14210 | R | Eic1ORF8305P (100% identity) | Eic2234ORF14185P | |
| 14215 | 58 aa hypothetical protein | |||
| 14720 | 184 aa hypothetical protein | |||
| 14725 | S | S.Eic1ORF8860P (100% identity) | S.Eic2234ORF14730P | |
| 14730 | M | M.Eic1ORF8860P (100% identity) | M.Eic2234ORF14730P | |
| 14735 | R | Eic1ORF8860P (100% identity) | Eic2234ORF14730P | |
| 14740 | 338 aa hypothetical protein | |||
| 15715 | IS256-like element ISEic2 family transposase | |||
| 15720 | R | Eic1ORF9690P (100% identity) | Eic2234ORF15735P | |
| 15725 | S | S2.AtoZS39ORF4750P (69% identity) | S2.Eic2234ORF15735P | |
| 15730 | S | S.Eic1ORF9690P (100% identity) | S1.Eic2234ORF15735P | |
| 15735 | M | M.Eic1ORF9690P (100% identity) | M.Eic2234ORF15735P | |
| 15740 | inovirus-type Gp2 protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 6250 | Rha family transcriptional regulator | |||
| 6255 | M | M.Epi7275ORF9110P (87% identity) | M.Eic2234ORF6255P | |
| 6260 | 51 aa hypothetical protein | |||
| 15800 | ribulose-phosphate 3-epimerase | |||
| 15805 | M | M.EicYCHDamP (100% identity) | GATC | M.Eic2234DamP |
| 15810 | SPOR domain-containing protein | |||
| plasmid pEI-2234-3 | ||||
| 17655 | 100 aa hypothetical protein | |||
| 17660 | M | M.Sen1271ORF23350P (82% identity) | M.Eic2234ORF17660P | |
| 17665 | 143 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 15020 | DNA-binding transcriptional regulator Fis | |||
| 15025 | R | Ave3301ORF17780P (99% identity) | Eic2234ORF15030P | |
| 15030 | M | M.Pag758ORF940P (69% identity) | M.Eic2234ORF15030P | |
| 15035 | DUF4276 family protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 4270 | type I restriction endonuclease subunit R | |||
| 4275 | R | EicK3McrBP (84% identity) | Eic2234McrBP | |
| 4280 | R | Eic1McrCP (100% identity) | Eic2234McrCP | |
| 4285 | 154 aa hypothetical protein | |||