Pseudomonas aeruginosa A-I-1 |
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Putative Pseudomonas aeruginosa A-I-1 RM systems
Ref: Cottalorda,A. et al. unpublished
REBASE ref # 32246
Complete sequence: 7,087,087 bp
GenBank #: CP060243
REBASE acronym: PaeAI1
Org_num: 48716
All begin I5155_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 353 | 94 aa hypothetical protein | |||
| 354 | M | M.PaesAG1ORF291P (100% identity) | ATGNNNNNNCCTC | M.PaeAI1ORF354P |
| 355 | S | S.PaesAG1ORF291P (100% identity) | ATGNNNNNNCCTC | S.PaeAI1ORF354P |
| 356 | transcriptional regulator | |||
| 357 | R | PaesAG1ORF291P (100% identity) | ATGNNNNNNCCTC | PaeAI1ORF354P |
| 358 | helix-turn-helix transcriptional regulator | |||
| 2613 | MerR family transcriptional regulator | |||
| 2615 | M | M.PaesAG1ORF2671P (90% identity) | CCCANNNNNNTCG | M.PaeAI1ORF2615P |
| 2616 | S | S.PaesAG1ORF2671P (100% identity) | CCCANNNNNNTCG | S.PaeAI1ORF2615P |
| 2617 | 731 aa hypothetical protein | |||
| 2618 | OmpA family protein | |||
| 2619 | 547 aa hypothetical protein | |||
| 2620 | DEAD/DEAH box helicase | |||
| 2621 | AAA domain-containing protein | |||
| 2622 | restriction endonuclease | |||
| 2623 | R | PaesAG1ORF2679P (100% identity) | CCCANNNNNNTCG | PaeAI1ORF2615P |
| 2624 | integrase | |||
| 2622 | restriction endonuclease | |||
| 2623 | R | PaesAG1ORF2679P (100% identity) | PaeAI1ORF2623P | |
| 2624 | integrase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 5635 | nucleoid-associated protein YejK | |||
| 5636 | M | M.PaesAG1ORF5438P (100% identity) | M.PaeAI1ORF5636P | |
| 5637 | Arc family DNA-binding protein | |||
| 5867 | DEAD/DEAH box helicase | |||
| 5868 | RM | DtsCM13ORF16735P (100% identity) | PaeAI1ORF5868P | |
| 5869 | SMEK domain-containing protein | |||
| 5885 | 82 aa hypothetical protein | |||
| 5886 | R | PmeTTORFEP (100% identity) | CTCGAG | PaeAI1ORF5887P |
| 5887 | M | M.PmeTTORFEP (96% identity) | CTCGAG | M.PaeAI1ORF5887P |
| 5888 | recombinase family protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2620 | DEAD/DEAH box helicase | |||
| 2621 | R | PaeUKJ55McrBP (100% identity) | PaeAI1McrBP | |
| 2622 | R | Psp2021McrCP (100% identity) | PaeAI1McrCP | |
| 2623 | type I restriction endonuclease subunit R | |||