Salmonella enterica FDAARGOS_928 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Salmonella enterica FDAARGOS_928 RM systems
Ref: Sproer,C. et al. unpublished
REBASE ref # 31614
| Sequence length: | GenBank #: | |
| Chromosome: | 4,857,477 bp | CP065639 |
| plasmid unnamed: | 93,933 bp | CP065638 |
REBASE acronym: Sen928
Org_num: 46857
All begin I6G85_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 23230 | restriction endonuclease | |||
| 23235 | R | StyLT2IIP (100% identity) | GAGNNNNNNRTAYG | Sen928ORF23240P |
| 23240 | M | M.StyLTIII (100% identity) | GAGNNNNNNRTAYG | M.Sen928ORF23240P |
| 23245 | S | S.StyUK1II (100% identity) | GAGNNNNNNRTAYG | S.Sen928ORF23240P |
| 23250 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 5035 | cell division protein DamX | |||
| 5040 | M | M.StyTDamP (100% identity) | GATC | M.Sen928DamP |
| 5045 | ribulose-phosphate 3-epimerase | |||
| 5530 | DUF2556 family protein | |||
| 5535 | M | M.StyUK1III (100% identity) | ATGCAT | M.Sen928ORF5535P |
| 5540 | DNA-binding transcriptional regulator Fis | |||
| 12635 | phosphohydrolase | |||
| 12640 | M | M.StyUK1Dcm (100% identity) | CCWGG | M.Sen928DcmP |
| 12645 | V | V.StyUK1DcmP (100% identity) | V.Sen928DcmP | |
| 12650 | drug/metabolite exporter YedA | |||
| 23390 | BREX system P-loop protein BrxC | |||
| 23395 | RM | StyUK1IV (100% identity) | GATCAG | Sen928ORF23395P |
| 23400 | AAA family ATPase | |||
| plasmid unnamed | ||||
| 115 | 73 aa hypothetical protein | |||
| 120 | M | M.StyUK1ORFAP (100% identity) | M.Sen928ORF120P | |
| 125 | 118 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 21040 | 33 aa hypothetical protein | |||
| 21045 | R | StyUK1IP (99% identity) | CAGAG | Sen928ORF21050P |
| 21050 | M | M.StyUK1I (100% identity) | CAGAG | M.Sen928ORF21050P |
| 21055 | MFS transporter | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 23225 | BrnT family toxin | |||
| 23230 | R | StyUK1MrrP (100% identity) | Sen928Mrr2P | |
| 23235 | type I restriction-modification system | |||
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 8840 | TraR/DksA family transcriptional regulator | |||
| 8845 | M | M.StyLTORF13745P (100% identity) | M.Sen928ORF8845P | |
| 8850 | replication endonuclease | |||