Ref: Kohler,P. et al. Sci Rep 10 (1), 18580 (2020)

REBASE ref # 31663

Sequence length:GenBank #:
Chromosome: 5,050,163 bp CP047773
plasmid pCfr13-1: 85,777 bp CP047774
plasmid pCfr13-2: 81,066 bp CP047775

REBASE acronym: CfrCfr13

Org_num: 46183

 

All begin GVI61_

Type I
ORF Gene Most similar Specificity Name
 
Chromosome
 
21290 TIR domain-containing protein
21295 R Eco803RtORF17695P (99% identity) CfrCfr13ORF21300P
21300 M M.Eco4282ORFDP (98% identity) M.CfrCfr13ORF21300P
21305 S S.EcosAW17ORF20460P (100% identity) S.CfrCfr13ORF21300P
21310 529 aa hypothetical protein
Type II
ORF Gene Most similar Specificity Name
 
Chromosome
 
1770 cell division protein DamX
1775 M M.Eco11104DamP (100% identity) GATC M.CfrCfr13DamP
1780 ribulose-phosphate 3-epimerase
 
2270 DUF2556 domain-containing protein
2275 M M.Csp302ORFAP (100% identity) ATGCAT M.CfrCfr13ORF2275P
2280 DNA-binding transcriptional regulator Fis
 
5740 118 aa hypothetical protein
5745 R CpoC275ORFBP (100% identity) C CfrCfr13ORF5745P
5750 DNA primase
 
6145 DUF550 domain-containing protein
6150 M M.Cfr942ORF11350P (92% identity) M.CfrCfr13ORF6150P
6155 83 aa hypothetical protein
 
6240 NinG family protein
6245 M M.Cfr370ORF6320P (99% identity) M.CfrCfr13ORF6245P
6250 antitermination protein
 
9695 phosphohydrolase
9700 M M.Cpo52230ORF18760P (100% identity) CCWGG M.CfrCfr13ORF9700P
9705 V V.CpoK218ORF11815P (100% identity) V.CfrCfr13ORF9700P
9710 drug/metabolite exporter YedA
 
18090 94 aa hypothetical protein
18095 M M.Esp422ORF5740P (96% identity) M.CfrCfr13ORF18095P
18100 72 aa hypothetical protein
 
21195 FAD-dependent oxidoreductase
??? R CfrLDL33ORF20330P (100% identity) CfrCfr13ORF21200P
21205 helix-turn-helix domain-containing protein
 
plasmid pCfr13-1
 
24410 recombination-associated protein RdgC
24415 M M.Cfr13639ORF5812P (99% identity) M.CfrCfr13ORF24415P
24420 97 aa hypothetical protein
 
plasmid pCfr13-2
 
25125 IS6-like element IS6100 family transposase
25130 R YpsR1ORFAP (100% identity) CCWGG CfrCfr13ORF25135P
??? M M.SenCEPR1ORF23900P (100% identity) CCWGG M.CfrCfr13ORF25135P
25140 IS1 family transposase
Type III
ORF Gene Most similar Specificity Name
 
Chromosome
 
15495 integrase arm-type DNA-binding domain-containing
15500 M M.Cfr023IV (99% identity) GCGCAG M.CfrCfr13ORF15500P
15505 R Cfr023IVP (41% identity) GCGCAG CfrCfr13ORF15500AP
15510 IS3 family transposase
15515 IS1 family transposase
15520 R Cfr023IVP (57% identity) GCGCAG CfrCfr13ORF15500BP
15525 shufflon system plasmid conjugative transfer