Salmonella enterica LHICA_E1 |
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Putative Salmonella enterica LHICA_E1 RM systems
Ref: Lamas,A. et al. unpublished
REBASE ref # 31876
Complete sequence: 5,016,132 bp
GenBank #: CP065419
REBASE acronym: SenCAE1
Org_num: 46860
All begin I5080_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 21050 | restriction endonuclease | |||
| 21055 | M | M.SenCASA3ORF20230P (97% identity) | M.SenCAE1ORF21055P | |
| ??? | S | S.SenCASA3ORF20230P (76% identity) | S.SenCAE1ORF21055P | |
| 21075 | R | SenCASA3ORF20230P (99% identity) | SenCAE1ORF21055P | |
| 21080 | ATP-binding protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1585 | cell division protein DamX | |||
| ??? | M | M.Sen388789DamP (97% identity) | GATC | M.SenCAE1DamP |
| 1595 | ribulose-phosphate 3-epimerase | |||
| 2140 | DUF2556 family protein | |||
| 2145 | M | M.Sen2213ORF5940P (86% identity) | ATGCAT | M.SenCAE1ORF2145P |
| 2150 | DNA-binding transcriptional regulator Fis | |||
| 6320 | DUF4060 family protein | |||
| ??? | M | M.SenCASA1ORF6290P (96% identity) | M.SenCAE1ORF6325P | |
| 6330 | YqaJ viral recombinase family protein | |||
| 10265 | HD domain-containing protein | |||
| 10270 | M | M.SenCASA3DcmP (99% identity) | CCWGG | M.SenCAE1DcmP |
| 10275 | V | V.Ssp11881DcmP (96% identity) | V.SenCAE1DcmP | |
| 10280 | drug/metabolite exporter YedA | |||
| 15340 | 112 aa hypothetical protein | |||
| 15345 | M | M.SenCASA3ORF14970P (99% identity) | M.SenCAE1ORF15345P | |
| 15350 | 83 aa hypothetical protein | |||
| 16650 | protein ninD | |||
| 16655 | M | M.SenCASA1ORF16490P (97% identity) | M.SenCAE1ORF16655P | |
| 16660 | recombination protein NinB | |||
| 21225 | YebC/PmpR family DNA-binding transcriptional | |||
| 21230 | R | SenCASA3ORF20375P (100% identity) | SenCAE1ORF21230P | |
| 21240 | ParA family protein | |||
| 22320 | DUF4942 domain-containing protein | |||
| 22325 | M | M.SenCASA3ORF21450P (98% identity) | M.SenCAE1ORF22325P | |
| 22330 | R | SenCASA3ORF21450P (98% identity) | SenCAE1ORF22325P | |
| 22335 | AraC family transcriptional regulator | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 18935 | 33 aa hypothetical protein | |||
| 18940 | R | Sen53897ORF18620P (99% identity) | CAGAG | SenCAE1ORF18945P |
| 18945 | M | M.SenSe29ORF17380P (98% identity) | CAGAG | M.SenCAE1ORF18945P |
| 18950 | MFS transporter | |||