Vibrio navarrensis 20-VB00237 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Vibrio navarrensis 20-VB00237 RM systems
Ref: Schwartz,K. et al. unpublished
REBASE ref # 32503
| Sequence length: | GenBank #: | |
| chromosome 1: | 3,534,271 bp | CP065217 |
| chromosome 2: | 1,395,396 bp | CP065218 |
REBASE acronym: Vna237
Org_num: 49801
All begin I3X05_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| chromosome 1 | ||||
| 5440 | 294 aa hypothetical protein | |||
| 5445 | M | M.Vvu249787ORF3670P (98% identity) | M.Vna237ORF5445P | |
| 5450 | S | S1.Vna1106ORFEP (98% identity) | S1.Vna237ORF5445P | |
| 5455 | S | S.Pvu109ORF7915P (35% identity) | S2.Vna237ORF5445P | |
| 5460 | IS66 family transposase | |||
| 5465 | IS66 family insertion sequence element accessory | |||
| 5470 | IS66 family insertion sequence hypothetical | |||
| 5475 | S | S.Ncr49181ORF893P (34% identity) | S3.Vna237ORF5445P | |
| 5480 | SIR2 family protein | |||
| 5485 | R | VanS229ORF10020P (97% identity) | Vna237ORF5445P | |
| 5490 | SWIM zinc finger domain-containing protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| chromosome 1 | ||||
| 1435 | AAA family ATPase | |||
| 1440 | M | M.Vna90DamP (99% identity) | GATC | M.Vna237DamP |
| 1445 | ribulose-phosphate 3-epimerase | |||
| 10455 | YqaJ viral recombinase family protein | |||
| 10460 | M | M2.Vna2232ORF6935P (87% identity) | M.Vna237ORF10460P | |
| 10465 | 80 aa hypothetical protein | |||
| 10475 | DUF2303 family protein | |||
| 10480 | M | M.Vme950200ORFCP (86% identity) | M.Vna237ORF10480P | |
| 10485 | 60 aa hypothetical protein | |||
| 14675 | HAD family hydrolase | |||
| 14680 | M | M.SboC13ORFAP (52% identity) | M.Vna237ORF14680P | |
| 14685 | R | PamM71ORF4865P (17% identity) | Vna237ORF14680P | |
| 14690 | DNA-directed DNA polymerase | |||
| 16955 | 125 aa hypothetical protein | |||
| 16960 | R | Vsp68ORF19205P (74% identity) | Vna237ORF16965P | |
| 16965 | M | M.Vsp68ORF19205P (81% identity) | M.Vna237ORF16965P | |
| 16970 | ATP-dependent protease | |||
| chromosome 2 | ||||
| 18825 | BREX system P-loop protein BrxC | |||
| 18830 | RM | VshORF23949P (65% identity) | Vna237ORF18830P | |
| 18835 | DNA repair protein | |||