Salmonella enterica subsp. enterica serovar Indiana S530 |
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Putative Salmonella enterica subsp. enterica serovar Indiana S530 RM systems
Ref: Hua,X. and Yu,Y. unpublished
REBASE ref # 24129
Complete sequence: 5,059,260 bp
GenBank #: CP061118
REBASE acronym: SenS530
Org_num: 46905
All begin IBZ01_
| Type II | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 1750 | cell division protein DamX | |||
| 1755 | M | M.StyTDamP (100% identity) | GATC | M.SenS530DamP |
| 1760 | ribulose-phosphate 3-epimerase | |||
| 2245 | DUF2556 family protein | |||
| 2250 | M | M.Sensp14178ORF2230P (100% identity) | ATGCAT | M.SenS530ORF2250P |
| 2255 | DNA-binding transcriptional regulator Fis | |||
| 2435 | 55 aa hypothetical protein | |||
| 2440 | M | M.YpsF1ORFCP (100% identity) | M.SenS530ORF2440P | |
| 2445 | thermonuclease family protein | |||
| 3975 | DEAD/DEAH box helicase | |||
| 3980 | RM | SflLIN17ORF3140P (100% identity) | SenS530ORF3980P | |
| 3985 | transposase | |||
| 10315 | phosphohydrolase | |||
| 10320 | M | M.SspZ54DcmP (100% identity) | CCWGG | M.SenS530DcmP |
| 10325 | V | V.Sensp14178DcmP (100% identity) | V.SenS530DcmP | |
| 10330 | drug/metabolite exporter YedA | |||
| 20795 | YebC/PmpR family DNA-binding transcriptional | |||
| 20800 | R | Sensp14178ORF19855P (100% identity) | SenS530ORF20800P | |
| 20805 | 347 aa hypothetical protein | |||
| 21790 | H-NS histone family protein | |||
| 21795 | M | M.SenI222DndBP (100% identity) | M.SenS530DndBP | |
| 21800 | DNA phosphorothioation system sulfurtransferase | |||
| 21795 | DNA sulfur modification protein DndB | |||
| 21800 | M | M.SenI222DndCP (100% identity) | M.SenS530DndCP | |
| 21805 | DNA sulfur modification protein DndD | |||
| 21800 | DNA phosphorothioation system sulfurtransferase | |||
| 21805 | M | M.SenI222DndDP (100% identity) | M.SenS530DndDP | |
| 21810 | DNA sulfur modification protein DndE | |||
| 21805 | DNA sulfur modification protein DndD | |||
| 21810 | M | M.SenI222DndEP (100% identity) | M.SenS530DndEP | |
| 21815 | AAA family ATPase | |||
| 21820 | DUF262 domain-containing protein | |||
| 21825 | R | SenI222DptHP (100% identity) | SenS530DptHP | |
| 21830 | DNA phosphorothioation-dependent restriction | |||
| 21825 | DNA phosphorothioation-dependent restriction | |||
| 21830 | R | SenI222DptGP (99% identity) | SenS530DptGP | |
| 21835 | DNA phosphorothioation-dependent restriction | |||
| 21830 | DNA phosphorothioation-dependent restriction | |||
| 21835 | R | SenI222DptFP (100% identity) | SenS530DptFP | |
| 21840 | superoxide dismutase family protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 18190 | 33 aa hypothetical protein | |||
| 18195 | R | Sensp14154ORF17330P (100% identity) | CAGAG | SenS530ORF18205P |
| 18200 | IS1 family transposase | |||
| 18205 | M | M.Sensp14152ORF17835P (100% identity) | CAGAG | M.SenS530ORF18205P |
| 18210 | MFS transporter | |||
| 20870 | S8 family peptidase | |||
| 20875 | M | M.Sensp14178ORF19930P (100% identity) | CGGAAC | M.SenS530ORF20875P |
| 20880 | R | Sensp14178ORF19930P (100% identity) | CGGAAC | SenS530ORF20875P |
| 20885 | integrase arm-type DNA-binding domain-containing | |||