Bacteroides species HF-162 |
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Putative Bacteroides species HF-162 RM systems
Ref: Ge,Y. unpublished
REBASE ref # 28395
Complete sequence: 4,384,378 bp
GenBank #: CP064937
REBASE acronym: BspHF162
Org_num: 46128
All begin ITJ87_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 9450 | helix-turn-helix transcriptional regulator | |||
| 9455 | R | AspH24ORF3890P (99% identity) | BspHF162ORF9465P | |
| 9460 | GIY-YIG nuclease family protein | |||
| 9465 | M | M.AspH24ORF3890P (100% identity) | M.BspHF162ORF9465P | |
| 9470 | virulence RhuM family protein | |||
| 9475 | S | S1.BxyC03ORF179P (56% identity) | S1.BspHF162ORF9465P | |
| 9480 | S | S4.Pvu3C24ORF1473P (42% identity) | S2.BspHF162ORF9465P | |
| 9485 | S | S1.Pvu3C24ORF1473P (48% identity) | S3.BspHF162ORF9465P | |
| 9490 | S | S4.Bfr4096BORF14130P (59% identity) | S4.BspHF162ORF9465P | |
| 9495 | site-specific integrase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 105 | site-specific integrase | |||
| 110 | M | M.Bsa18170ORF1173P (94% identity) | M.BspHF162ORF110P | |
| 115 | RM | Bsa18170ORF1174P (91% identity) | BspHF162ORF110P | |
| 120 | SIR2 family protein | |||
| 1115 | helix-turn-helix domain-containing protein | |||
| 1120 | RM | PmeBin96ORFBP (97% identity) | BspHF162ORF1120P | |
| 1130 | transposase | |||
| 11465 | PglZ domain-containing protein | |||
| 11470 | RM | BspA1C1ORF16785P (87% identity) | BspHF162ORF11470P | |
| 11475 | BREX system P-loop protein BrxC | |||
| 12005 | DUF551 domain-containing protein | |||
| 12010 | M | M.Pvu1099ORF11120P (100% identity) | M.BspHF162ORF12010P | |
| 12015 | phosphoadenosine phosphosulfate reductase family | |||
| 12050 | 139 aa hypothetical protein | |||
| 12055 | M | M.Pvu191ORF10140P (98% identity) | M.BspHF162ORF12055P | |
| 12060 | 178 aa hypothetical protein | |||
| 13705 | 116 aa hypothetical protein | |||
| 13710 | M | M.PmeBin11ORFAP (92% identity) | M.BspHF162ORF13710P | |
| 13715 | 124 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 8780 | 71 aa hypothetical protein | |||
| 8785 | M | M.Bsp737ORF2095P (100% identity) | M.BspHF162ORF8785P | |
| 8790 | virulence RhuM family protein | |||
| 8795 | R | Bsp10229ORF8825P (99% identity) | BspHF162ORF8785P | |
| 8800 | DNA-binding protein | |||