Escherichia coli isolate L5_E1779_ETEC |
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Putative Escherichia coli isolate L5_E1779_ETEC RM systems
Ref: Page,A. and Bastkowski,S. unpublished
REBASE ref # 31576
| Sequence length: | GenBank #: | |
| chromosome 1: | 4,982,341 bp | LR883006 |
| plasmid 2: | 46,243 bp | LR883007 |
| plasmid 3: | 142,377 bp | LR883008 |
| plasmid 4: | 88,759 bp | LR883009 |
| plasmid 5: | 82,464 bp | LR883010 |
REBASE acronym: EcoE1779
Org_num: 45921
All begin ETECE1779_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| chromosome 1 | ||||
| 4754 | methylated adenine and cytosine restriction protein | |||
| 4755 | R | Ecos15955ORF12100P (100% identity) | EcoE1779ORF4756P | |
| 4756 | M | M.Ecos15955ORF12100P (100% identity) | M.EcoE1779ORF4756P | |
| 4757 | S | S.Ecos15955ORF12100P (100% identity) | S.EcoE1779ORF4756P | |
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| chromosome 1 | ||||
| 909 | cell division protein DamX | |||
| 910 | M | M.UbaC1152DamP (100% identity) | GATC | M.EcoE1779DamP |
| 911 | DNA adenine methylase | |||
| 1023 | Protein of uncharacterised function (DUF2556) | |||
| 1024 | M | M.SspS13ORF21055P (100% identity) | ATGCAT | M.EcoE1779ORF1024P |
| 1025 | DNA-binding transcriptional regulator Fis | |||
| 1753 | TraR/DksA family transcriptional regulator | |||
| 1754 | M | M.EcoF1005ORF10740P (100% identity) | GATC | M.EcoE1779ORF1754P |
| 1755 | Bacteriophage replication gene A protein (GPA) | |||
| 2499 | phosphohydrolase | |||
| 2500 | M | M.SflLIN6DcmP (100% identity) | CCWGG | M.EcoE1779DcmP |
| 2501 | V | V.SflFF59DcmP (100% identity) | V.EcoE1779DcmP | |
| 2502 | drug/metabolite exporter YedA | |||
| 2921 | Uncharacterised protein | |||
| 2922 | M | M.EcoH3ORF13800P (100% identity) | M.EcoE1779ORF2922P | |
| 2925 | Uncharacterised protein | |||
| 3439 | Uncharacterised protein | |||
| 3443 | M | M.EcoETECORF1210P (100% identity) | M.EcoE1779ORF3443P | |
| 3444 | Uncharacterised protein | |||
| 4811 | integrase | |||
| 4812 | M | M.SenUA38ORF610P (100% identity) | M.EcoE1779ORF4812P | |
| 4813 | R | Eco504237ORFAP (81% identity) | EcoE1779ORF4812P | |
| 4814 | Uncharacterised protein | |||
| plasmid 2 | ||||
| 36 | transmembrane protein | |||
| 37 | M | M.EcoPnTigORFFP (100% identity) | M.EcoE1779ORF37P | |
| 38 | Uncharacterised protein | |||
| plasmid 3 | ||||
| 101 | Protein of uncharacterised function (DUF1281) | |||
| 102 | M | M.EcoR3001ORF25605P (100% identity) | M.EcoE1779ORF102P | |
| 103 | Uncharacterised protein | |||
| plasmid 4 | ||||
| 350 | TnpA, transposase | |||
| 351 | M | M.EcoR3001ORF25605P (100% identity) | M.EcoE1779ORF351P | |
| 352 | Uncharacterised protein | |||
| plasmid 5 | ||||
| 436 | TnpA, transposase | |||
| 435 | M | M.Eco899037ORF25745P (100% identity) | M.EcoE1779ORF435P | |
| 434 | Uncharacterised protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| chromosome 1 | ||||
| 4753 | GTP-binding protein YjiA | |||
| 4754 | R | Eco6C6MrrP (100% identity) | EcoE1779MrrP | |
| 4755 | Type I restriction enzyme EcoKI R protein HsdR | |||