Salmonella enterica subsp. enterica serovar Typhimurium LT7 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Salmonella enterica subsp. enterica serovar Typhimurium LT7 RM systems
Ref: Zaworski,J. et al. unpublished
REBASE ref # 31557
Complete sequence: 4,817,454 bp
GenBank #: CP064263
REBASE acronym: StyLT
Org_num: 2273
All begin ITP16_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 22795 | endoribonuclease SymE | |||
| 22800 | S | S.StyUK1II (100% identity) | GAGNNNNNNRTAYG | S.StyLTIII |
| 22805 | M | M.StyLT2II (100% identity) | GAGNNNNNNRTAYG | M.StyLTIII |
| 22810 | type I restriction-modification system | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 9935 | drug/metabolite exporter YedA | |||
| 9940 | V | V.StyUK1DcmP (100% identity) | CCWGG | V.StyLTDcmP |
| 9945 | M | M.StyUK1Dcm (100% identity) | CCWGG | M.StyLTDcm |
| 9950 | phosphohydrolase | |||
| 17055 | DNA-binding transcriptional regulator Fis | |||
| 17060 | M | M.StyUK1III (100% identity) | ATGCAT | M.StyLTIV |
| 17065 | DUF2556 family protein | |||
| 17550 | ribulose-phosphate 3-epimerase | |||
| 17555 | M | M.StyTDamP (100% identity) | GATC | M.StyLTDam |
| 17560 | cell division protein DamX | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1815 | site-specific DNA-methyltransferase | |||
| 1820 | R | StyUK1IP (99% identity) | CAGAG | StyLTVP |
| 1825 | 33 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 22620 | ATP-binding protein | |||
| 22625 | R | Sens94Mrr2P (100% identity) | StyLTMrrP | |
| 22630 | protease Lon-related BREX system protein BrxL | |||
| 22810 | type I restriction-modification system | |||
| 22815 | R | StyUK1MrrP (100% identity) | StyLTMrr2P | |
| 22820 | BrnT family toxin | |||
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 13740 | replication endonuclease | |||
| 13745 | M | M.StyLT2ORF13750P (100% identity) | M.StyLTORF13745P | |
| 13750 | TraR/DksA family transcriptional regulator | |||