Neisseria gonorrhoeae TUM 19855 |
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Putative Neisseria gonorrhoeae TUM 19855 RM systems
Ref: Hanao,M. et al. unpublished
REBASE ref # 30554
Complete sequence: 2,167,741 bp
GenBank #: AP024155
REBASE acronym: Ngo19855
Org_num: 45852
All begin TUM19855C_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 4490 | ADP-L-glycero-D-manno-heptose-6-epimerase | |||
| 4500 | M | M.Ngos1291ORF7750P (100% identity) | GCANNNNNNNGTC | M.Ngo19855ORF4500P |
| 4510 | DNA damage-inducible protein D | |||
| ??? | S | S.NgoJH16ORFHP (99% identity) | GCANNNNNNNGTC | S.Ngo19855ORF4500P |
| 4550 | R | NgoWSIIP (100% identity) | GCANNNNNNNGTC | Ngo19855ORF4500P |
| 4560 | ATP-dependent Clp protease ATP-binding subunit | |||
| 7470 | ATPase AAA | |||
| 7480 | R | NgoWSIP (100% identity) | GAGNNNNNTAC | Ngo19855ORF7530P |
| 7490 | 77 aa hypothetical protein | |||
| 7500 | S | S.NgoWSI (100% identity) | GAGNNNNNTAC | S.Ngo19855ORF7530P |
| 7510 | 186 aa hypothetical protein | |||
| 7520 | 279 aa hypothetical protein | |||
| 7530 | M | M.NgoWSI (100% identity) | GAGNNNNNTAC | M.Ngo19855ORF7530P |
| 7540 | 3,4-dihydroxy-2-butanone-4-phosphate synthase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 60 | leucine--tRNA ligase | |||
| 70 | R | Ngos1291ORF5750P (100% identity) | GATC | Ngo19855ORF80P |
| ??? | M | M.NgoWSORF8P (100% identity) | GATC | M.Ngo19855ORF80P |
| 90 | 151 aa hypothetical protein | |||
| 2260 | IS1595 family transposase | |||
| 2270 | M | M.Ngos1291ORF260P (100% identity) | CCGCGG | M.Ngo19855ORF2270P |
| 2280 | R | Ngos1291ORF260P (100% identity) | CCGCGG | Ngo19855ORF2270P |
| 2290 | UvrABC system protein A | |||
| 3440 | phenylalanine--tRNA ligase alpha subunit | |||
| 3450 | V | V.NgoWSORF391P (100% identity) | V.Ngo19855ORF3460P | |
| ??? | M | M.NgoWSORF391P (100% identity) | M.Ngo19855ORF3460P | |
| 3480 | R | NgoWSORF391P (100% identity) | Ngo19855ORF3460P | |
| 3490 | phenylalanine--tRNA ligase beta subunit | |||
| 4010 | 215 aa hypothetical protein | |||
| 4020 | RM | Ngos1291ORF7515P (100% identity) | GACNNNNNTGA | Ngo19855ORF4020P |
| 4030 | S | S.NgoWSORF450P (100% identity) | GACNNNNNTGA | S.Ngo19855ORF4020P |
| 4040 | 140 aa hypothetical protein | |||
| 4080 | uroporphyrinogen decarboxylase | |||
| 4090 | H | H.Ngos1291ORF7560P (100% identity) | H.Ngo19855ORF4110P | |
| 4100 | R | Ngos1291ORF7560P (100% identity) | GCSGC | Ngo19855ORF4110P |
| 4110 | M | M.Ngos1291ORF7560P (100% identity) | GCSGC | M.Ngo19855ORF4110P |
| 4120 | 75 aa hypothetical protein | |||
| 7220 | 3-isopropylmalate dehydrogenase | |||
| 7230 | R | NgoWSORF784P (100% identity) | GGNNCC | Ngo19855ORF7240P |
| 7240 | M | M.Ngo19854ORF7260P (100% identity) | GGNNCC | M.Ngo19855ORF7240P |
| 7250 | 3-isopropylmalate dehydratase small subunit | |||
| 9150 | anthranilate synthase component 1 | |||
| 9160 | M | M.Ngos1291ORF10080P (100% identity) | GCCGGC | M.Ngo19855ORF9160P |
| 9170 | R | Ngos1291ORF10080P (100% identity) | GCCGGC | Ngo19855ORF9160P |
| 9180 | N5-carboxyaminoimidazole ribonucleotide | |||
| 15860 | 449 aa hypothetical protein | |||
| 15870 | V | V.Ngos1291ORF65P (100% identity) | V.Ngo19855ORF15900P | |
| ??? | R | Ngos1291ORF65P (100% identity) | Ngo19855ORF15900P | |
| ??? | M | M.NgoSH240ORFLP (100% identity) | M.Ngo19855ORF15900P | |
| 15910 | pilus assembly protein PilE | |||
| 18000 | cysteine--tRNA ligase | |||
| 18010 | R | Ngos1291ORF4640P (100% identity) | RGCGCY | Ngo19855ORF18020P |
| 18020 | M | M.Ngos1291ORF4640P (100% identity) | RGCGCY | M.Ngo19855ORF18020P |
| 18030 | GTPase Obg | |||
| 18940 | RNA-binding protein | |||
| 18950 | M | M1.NgoWSIII (100% identity) | GGTGA | M1.Ngo19855ORF18950P |
| 18960 | M | M1.Ngos1291II (100% identity) | GGTGA | M2.Ngo19855ORF18950P |
| 18970 | R | NgoWFIIP (100% identity) | GGTGA | Ngo19855ORF18950P |
| 18980 | sodium/glutamate symporter | |||
| 20020 | ribosome-recycling factor | |||
| 20030 | M | M.Ngos1291ORF3515P (100% identity) | GGCC | M.Ngo19855ORF20030P |
| ??? | R | NgoWSORF2276P (100% identity) | GGCC | Ngo19855ORF20030P |
| 20060 | membrane protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 5920 | peptidyl-prolyl cis-trans isomerase | |||
| 5930 | M | M.Ngos1291ORF8455P (100% identity) | CCACC | M.Ngo19855ORF5930P |
| 5940 | R | Ngos1291ORF8455P (100% identity) | CCACC | Ngo19855ORF5930P |
| 5950 | tRNA 2-thiocytidine biosynthesis protein TtcA | |||
| 6880 | alpha-hydroxy-acid oxidizing enzyme | |||
| 6890 | R | NgoWSORF749P (100% identity) | GCAGA | Ngo19855ORF6900P |
| ??? | M | M.NgoNG290ORF3570P (100% identity) | GCAGA | M.Ngo19855ORF6900P |
| 6920 | tRNA pseudouridine synthase B | |||