Desulfovibrio desulfuricans G20 |
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Putative Desulfovibrio desulfuricans G20 RM systems
Ref: Copeland,A. et al. unpublished
REBASE ref # 9167
Complete sequence: 3,730,232 bp
GenBank #: CP000112 (NC_007519)
REBASE acronym: DdeG
Org_num: 4195
All begin Dde_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 1858 | restriction endonuclease | |||
| 1859 | R | Psp1480ORF8930P (98% identity) | DdeGORF1861P | |
| 1860 | S | S.PspZM2ORF1220P (99% identity) | S.DdeGORF1861P | |
| 1861 | M | M.Psp1480ORF8930P (94% identity) | M.DdeGORF1861P | |
| 1862 | DNA binding domain protein, excisionase family | |||
| 2495 | 630 aa hypothetical protein | |||
| 2496 | S | S.PveP13ORF7735P (69% identity) | S.DdeGORF2498P | |
| 2497 | 351 aa hypothetical protein | |||
| 2498 | M | M.DmuORFBP (98% identity) | M.DdeGORF2498P | |
| 2499 | R | DmuORFBP (97% identity) | DdeGORF2498P | |
| 2500 | helix-turn-helix domain protein | |||
| 2867 | filamentation induced by cAMP protein Fic | |||
| 2868 | M | M.Spu10738II (98% identity) | M.DdeGORF2868P | |
| 2869 | S | S.Pae483ORF22125P (56% identity) | S.DdeGORF2868P | |
| 2870 | R | AfaJQ135ORF12300P (98% identity) | DdeGORF2868P | |
| 2871 | transposase IS204/IS1001/IS1096/IS1165 family | |||
| 4051 | DNA methyltransferase | |||
| 3424 | R | AspDMS1ORF4470P (98% identity) | DdeGORF3427P | |
| 3425 | S | S.Asp64203ORF9495P (43% identity) | S.DdeGORF3427P | |
| 3426 | AAA-4 family protein | |||
| 3427 | Site-specific DNA-methyltransferase | |||
| 3428 | 75 aa hypothetical protein | |||
| 3429 | M | M1.GbaNRL1ORF6110P (99% identity) | M1.DdeGORF3427P | |
| 3430 | DNA binding domain protein, excisionase family | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 921 | 117 aa hypothetical protein | |||
| 922 | M | M.Dal16529ORF137P (99% identity) | GGATC | M.DdeGORF922P |
| 923 | 120 aa hypothetical protein | |||
| 1299 | 73 aa hypothetical protein | |||
| 1300 | M | M.DspJ2ORF6835P (64% identity) | M.DdeGORF1300P | |
| 1301 | Protein-disulfide reductase | |||
| 1903 | 120 aa hypothetical protein | |||
| 1904 | M | M.DteS28bFORFJP (80% identity) | GGATC | M.DdeGORF1904P |
| 1905 | 117 aa hypothetical protein | |||
| 3421 | glycoside hydrolase family 24 | |||
| ??? | M | M.DdeGORF4051P (100% identity) | M.DdeGORF3423P | |
| 3424 | type I site-specific deoxyribonuclease, HsdR | |||
| 3421 | glycoside hydrolase family 24 | |||
| 4051 | M | M.DdeGORF3423P (100% identity) | M.DdeGORF4051P | |
| 3424 | type I site-specific deoxyribonuclease, HsdR | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1741 | prophage antirepressor | |||
| 1742 | R | Mal898ORF1485P (74% identity) | DdeGORF1743P | |
| 1743 | M | M.Bsp18ORF1788P (40% identity) | M.DdeGORF1743AP | |
| 1744 | Integrase catalytic region, ISDde3 | |||
| 1746 | M | Site-specific DNA-methyltransferase | M.DdeGORF1743BP | |
| 1747 | 257 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1214 | Rubrerythrin | |||
| 1215 | R | Fsp34673ORFGP (16% identity) | DdeGMcrAP | |
| 1216 | Alkaline phosphatase | |||
| 2799 | phage regulatory protein, Rha family | |||
| 2800 | R | restriction endonuclease | DdeGMrr2P | |
| 2801 | Phage P22, antirepressor protein | |||