Campylobacter cuniculorum 2010D-8469 |
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Putative Campylobacter cuniculorum 2010D-8469 RM systems
Ref: Lane,C. unpublished
REBASE ref # 31448
Complete sequence: 1,930,985 bp
GenBank #: CP063091
REBASE acronym: Ccu8469
Org_num: 45416
All begin A0071_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 6580 | YbgC/FadM family acyl-CoA thioesterase | |||
| 6585 | M | M.Ccu24588ORF733P (100% identity) | M.Ccu8469ORF6585P | |
| 6590 | S | S.Ccu24588ORF733P (100% identity) | S.Ccu8469ORF6585P | |
| 6595 | R | Ccu24588ORF733P (100% identity) | Ccu8469ORF6585P | |
| 6600 | M48 family metallopeptidase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 390 | excinuclease ABC subunit UvrB | |||
| 395 | R | Ccu24588ORF1411P (91% identity) | Ccu8469ORF400P | |
| ??? | M | M1.Ccu24588ORF1411P (99% identity) | M1.Ccu8469ORF400P | |
| ??? | M | M2.Ccu24588ORF1411P (99% identity) | M2.Ccu8469ORF400P | |
| 410 | TdeIII family type II restriction endonuclease | |||
| 405 | site-specific DNA-methyltransferase | |||
| 410 | R | Hsp6451ORF8740P (87% identity) | Ccu8469ORF415P | |
| 415 | M | M.Ccu24588ORF1414P (100% identity) | M.Ccu8469ORF415P | |
| 420 | RdgB/HAM1 family non-canonical purine NTP | |||
| 2110 | endonuclease III domain-containing protein | |||
| 2115 | M | M.Ccu24588ORF1757P (100% identity) | M.Ccu8469ORF2115P | |
| 2120 | HNH endonuclease | |||
| 2180 | succinyl-diaminopimelate desuccinylase | |||
| 2185 | RM | Ccu24588ORF1771P (100% identity) | Ccu8469ORF2185P | |
| 2190 | sulfur carrier protein ThiS | |||
| 2550 | acetylglutamate kinase | |||
| 2555 | RM | Ccu24588ORF1842P (100% identity) | Ccu8469ORF2555P | |
| 2560 | GNAT family N-acetyltransferase | |||
| 2565 | N-acetyl-gamma-glutamyl-phosphate reductase | |||
| 2570 | M | M.Ccu24588ORF1845P (100% identity) | M.Ccu8469ORF2570P | |
| 2575 | translation initiation factor IF-3 | |||
| 2710 | DUF4156 domain-containing protein | |||
| 2715 | M | M.Ccu24588ORF1873P (100% identity) | M.Ccu8469ORF2715P | |
| 2720 | TIGR04076 family protein | |||
| 2785 | 293 aa hypothetical protein | |||
| 2790 | M | M.Ccu24588ORF1889P (90% identity) | M.Ccu8469ORF2790P | |
| 2795 | aldo/keto reductase | |||
| 2865 | DNA topoisomerase (ATP-hydrolyzing) subunit B | |||
| 2870 | M | M.Ccu24588ORF4P (100% identity) | M.Ccu8469ORF2870P | |
| 2875 | R | Ccu24588ORF4P (100% identity) | Ccu8469ORF2870P | |
| 2880 | DUF3413 domain-containing protein | |||
| 2885 | NADPH-dependent 7-cyano-7-deazaguanine reductase | |||
| ??? | R | Ccu24588ORF9P (100% identity) | Ccu8469ORF2900P | |
| 2900 | M | M.Ccu24588ORF9P (100% identity) | M.Ccu8469ORF2900P | |
| 2905 | 30S ribosomal protein S10 | |||
| 3705 | bifunctional phosphoribosyl-AMP | |||
| 3710 | R | Ccu24588ORF171P (100% identity) | Ccu8469ORF3715P | |
| 3715 | M | M.Ccu24588ORF171P (100% identity) | M.Ccu8469ORF3715P | |
| 3720 | 112 aa hypothetical protein | |||
| 3730 | 54 aa hypothetical protein | |||
| 3735 | RM | Ccu24588ORF173P (90% identity) | Ccu8469ORF3735P | |
| 3740 | imidazole glycerol phosphate synthase subunit | |||
| 3755 | HrgA protein | |||
| ??? | M | M.Ccu24588ORF179P (97% identity) | M.Ccu8469ORF3760P | |
| 3765 | R.Pab1 family restriction endonuclease | |||
| ??? | site-specific DNA-methyltransferase | |||
| 3765 | R | Ccu24588ORF181P (100% identity) | Ccu8469ORF3765P | |
| ??? | 359 aa hypothetical protein | |||
| 3765 | R.Pab1 family restriction endonuclease | |||
| ??? | M | M.Ccu24588ORF181P (98% identity) | M.Ccu8469ORF3770P | |
| 3775 | bifunctional | |||
| 6410 | inorganic diphosphatase | |||
| ??? | M | M.Ccu24588ORF704P (100% identity) | M.Ccu8469ORF6415P | |
| 6425 | IS1595 family transposase | |||
| 8515 | bifunctional hydroxymethylpyrimidine | |||
| 8520 | R | Ccu24588ORF1125P (100% identity) | Ccu8469ORF8525P | |
| 8525 | M | M.Ccu24588ORF1125P (100% identity) | M.Ccu8469ORF8525P | |
| 8530 | tetrahydrodipicolinate N-succinyltransferase | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2405 | lipid-A-disaccharide synthase | |||
| ??? | M | M.Ccu24588ORF1815P (100% identity) | M.Ccu8469ORF2410P | |
| ??? | R | Ccu24588ORF1815P (98% identity) | Ccu8469ORF2410P | |
| 2425 | DUF1561 family protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 170 | metal ABC transporter permease | |||
| 175 | R | Ccu24588McrCP (100% identity) | Ccu8469McrCP | |
| 180 | R | Ccu24588McrBP (100% identity) | Ccu8469McrBP | |
| 185 | DASS family sodium-coupled anion symporter | |||