Campylobacter species 2014D-0216 |
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Putative Campylobacter species 2014D-0216 RM systems
Ref: Lane,C. unpublished
REBASE ref # 31448
Complete sequence: 1,609,500 bp
GenBank #: CP063089
REBASE acronym: Csp216
Org_num: 45421
All begin A0083_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 1820 | NAD(P)-dependent alcohol dehydrogenase | |||
| 1825 | R | ClaSCHS02ORF1845P (99% identity) | GTANNNNNNNNTHTC | Csp216ORF1850P |
| 1830 | DUF1837 domain-containing protein | |||
| 1835 | DEAD/DEAH box helicase | |||
| 1840 | S | S.Cla8846ORF352P (98% identity) | GTANNNNNNNNTHTC | S.Csp216ORF1850P |
| 1845 | Fic family protein | |||
| 1850 | M | M.Csu24374II (99% identity) | GTANNNNNNNNTHTC | M.Csp216ORF1850P |
| 1855 | molybdopterin molybdotransferase MoeA | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 275 | translation initiation factor IF-3 | |||
| 280 | M | M.Cla12894I (96% identity) | RAATTY | M.Csp216ORF280P |
| 285 | 50S ribosomal protein L35 | |||
| 7565 | DUF4065 domain-containing protein | |||
| 7570 | RM | Cla16701ORF1425P (93% identity) | Csp216ORF7570P | |
| 7575 | monoheme c-type cytochrome | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 105 | replication-associated recombination protein A | |||
| 115 | R | ClaSBORF7985P (96% identity) | Csp216ORF120P | |
| 120 | M | M.Cje3ORF9575P (97% identity) | M.Csp216ORF120P | |
| 125 | DUF305 domain-containing protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1220 | ribosome maturation factor RimP | |||
| 1225 | R | Car73571McrBP (69% identity) | Csp216McrBP | |
| 1230 | R | Cla218McrCP (97% identity) | Csp216McrCP | |
| 1235 | bifunctional | |||