Ref: Lane,C. unpublished

REBASE ref # 31448

Complete sequence: 1,582,208 bp

GenBank #: CP063083

REBASE acronym: Cup6824

Org_num: 45422

 

All begin HW254_

Type I
ORF Gene Most similar Specificity Name
 
1345 16S rRNA (guanine(527)-N(7))-methyltransferase
1350 R Cup736ORF3125P (99% identity) Cup6824ORF1355P
1355 M M.Cup11840ORF327P (99% identity) M.Cup6824ORF1355P
1360 90 aa hypothetical protein
1365 type II toxin-antitoxin system RelE/ParE family
1370 S S.Cup11840ORF327P (75% identity) S.Cup6824ORF1355P
1375 MnmA/TRMU family protein
 
5000 UDP-N-acetylmuramate--L-alanine ligase
5005 R Cup3940ORF1056P (97% identity) Cup6824ORF5020P
5010 319 aa hypothetical protein
5015 S S.Cup736ORF6795P (63% identity) S.Cup6824ORF5020P
5020 M M.Cup3940ORF1056P (96% identity) M.Cup6824ORF5020P
5030 190 aa hypothetical protein
 
6440 239 aa hypothetical protein
6445 M M.Cup736ORF30P (97% identity) M.Cup6824ORF6445P
6450 S S2.Hwi430ORFBP (96% identity) S1.Cup6824ORF6445P
6455 S S.Cup197059ORF1382P (27% identity) S2.Cup6824ORF6445P
6460 483 aa hypothetical protein
 
7615 Tol-Pal system protein TolB
7620 M M.Cup11840ORF1616P (99% identity) M.Cup6824ORF7620P
7625 R Cup197059ORF1587P (98% identity) Cup6824ORF7620P
7630 S S.Cav24591ORF1589P (37% identity) S1.Cup6824ORF7620P
7635 S S2.Cup197059ORF1587P (97% identity) S2.Cup6824ORF7620P
7640 TonB C-terminal domain-containing protein
Type II
ORF Gene Most similar Specificity Name
 
2730 succinyl-diaminopimelate desuccinylase
2735 RM Cup197059ORF623P (98% identity) Cup6824ORF2735P
2740 284 aa hypothetical protein
 
3265 172 aa hypothetical protein
??? M M.Hca12410ORF1795P (84% identity) M.Cup6824ORF3270P
3280 R Che51209ORF832P (94% identity) Cup6824ORF3270P
3285 substrate-binding domain-containing protein
 
3540 204 aa hypothetical protein
3545 RM Cup11840ORF827P (99% identity) Cup6824ORF3545P
3550 restriction endonuclease subunit S
 
4420 ribbon-helix-helix domain-containing protein
4425 RM Cup736ORF6195P (99% identity) Cup6824ORF4425P
4430 glycerophosphodiester phosphodiesterase
 
4820 471 aa hypothetical protein
??? M M.Cup11840VI (99% identity) ACNGT M.Cup6824ORF4825P
4830 R Cup11840VIP (98% identity) ACNGT Cup6824ORF4825P
4835 prephenate dehydratase
 
5885 2-amino-4-hydroxy-6-
5890 R Cup3940ORF1229P (97% identity) Cup6824ORF5895P
5895 M M.Cup3940ORF1229P (100% identity) M.Cup6824ORF5895P
5900 DNA polymerase I
 
5985 N-methyl-L-tryptophan oxidase
??? M M.Cup736ORF7770P (99% identity) M.Cup6824ORF5990P
5995 R Cup736ORF7770P (99% identity) Cup6824ORF5990P
6000 DUF262 domain-containing protein
 
6085 ABC transporter ATP-binding protein
6090 M M.Cup736ORF7870P (100% identity) M.Cup6824ORF6090P
6095 676 aa hypothetical protein
 
6095 676 aa hypothetical protein
6100 M M.Cup3940ORF1271P (100% identity) M.Cup6824ORF6100P
6105 acetate--CoA ligase
 
6570 imidazole glycerol phosphate synthase subunit
6575 M M.Cup11541II (56% identity) M.Cup6824ORF6575P
6580 R Cup736ORF160P (97% identity) Cup6824ORF6575P
6585 bifunctional
 
7100 ABC-F family ATP-binding cassette
??? M M.Cup197059ORF1480P (97% identity) M.Cup6824ORF7105P
??? R Cup197059ORF1480P (99% identity) Cup6824ORF7105P
7115 4Fe-4S dicluster domain-containing protein
 
7880 N-acetyl-gamma-glutamyl-phosphate reductase
7885 R Cup736ORF1485P (99% identity) GGATG Cup6824ORF7890P
7890 M M1.Cup11840VIII (99% identity) GGATG M1.Cup6824ORF7890P
7895 M M2.Cup11840VIII (100% identity) GGATG M2.Cup6824ORF7890P
7900 DNA adenine methylase
 
7895 DNA adenine methylase
7900 M M.Cup3940ORF1628P (100% identity) RAATTY M.Cup6824ORF7900P
7905 cell surface protein
 
7940 type I DNA topoisomerase
7945 M M.Cup3940ORF1637P (99% identity) M.Cup6824ORF7945P
7950 194 aa hypothetical protein
 
7955 glutamate synthase large subunit
7960 M M.Cup197059ORF1654P (99% identity) M.Cup6824ORF7960P
7965 210 aa hypothetical protein
7970 R Cup197059ORF1654P (100% identity) Cup6824ORF7960P
7975 glutamate synthase subunit beta
 
7985 rRNA pseudouridine synthase
??? M M1.Cup736ORF1585P (100% identity) M1.Cup6824ORF7990P
7995 M M2.Cup736ORF1585P (100% identity) M2.Cup6824ORF7990P
8000 R Cup736ORF1585P (100% identity) Cup6824ORF7990P
8005 crossover junction endodeoxyribonuclease RuvC
Type III
ORF Gene Most similar Specificity Name
 
200 sodium:proton antiporter
205 R Cup11840ORF74P (98% identity) Cup6824ORF210P
210 M M.Cup14913ORF75P (65% identity) M.Cup6824ORF210P
215 SPASM domain-containing protein
 
2305 247 aa hypothetical protein
??? R Cup11840ORF522P (99% identity) Cup6824ORF2315P
??? M M.Cup29ORFAP (99% identity) M.Cup6824ORF2315P
2325 lipid-A-disaccharide synthase