Ralstonia solanacearum MAFF 301560 |
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Putative Ralstonia solanacearum MAFF 301560 RM systems
Ref: Ohnishi,K. et al. unpublished
REBASE ref # 31423
| Sequence length: | GenBank #: | |
| Chromosome: | 3,826,386 bp | AP024103 |
| plasmid pMAFF301560: | 1,936,579 bp | AP024104 |
REBASE acronym: Rso301560
Org_num: 45364
All begin MAFF301560_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 410 | HTH-type transcriptional regulator NsrR | |||
| 420 | M | M.RsoX05ORF971P (100% identity) | M.Rso301560ORF420P | |
| 430 | 284 aa hypothetical protein | |||
| 440 | R | RsoWR1ORFKP (88% identity) | Rso301560ORF420P | |
| 450 | sensor kinase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 70 | transposase | |||
| 80 | M | M.RsoUW763ORF40P (100% identity) | M.Rso301560ORF80P | |
| 90 | R | RsoUW763ORF40P (100% identity) | Rso301560ORF80P | |
| 100 | 208 aa hypothetical protein | |||
| ??? | V | V.RsoRS24ORF30P (100% identity) | V.Rso301560ORF80P | |
| 110 | 86 aa hypothetical protein | |||
| 2130 | 71 aa hypothetical protein | |||
| 2140 | M | M1.RsoRSNORF1245P (100% identity) | M1.Rso301560ORF2140P | |
| 2150 | M | M2.RsoYC40ORF234P (100% identity) | M2.Rso301560ORF2140P | |
| 2160 | 121 aa hypothetical protein | |||
| 2520 | 1367 aa hypothetical protein | |||
| 2530 | M | M.Rso53F8ORFCP (100% identity) | M.Rso301560ORF2530P | |
| 2540 | IS5 family transposase | |||
| 10150 | 68 aa hypothetical protein | |||
| 10160 | M | M.RsoRS24ORF5140P (71% identity) | M.Rso301560ORF10160P | |
| 10170 | late control protein D | |||
| 15250 | tryptophan synthase beta chain | |||
| 15260 | M | M.Rsp650ORF7450P (100% identity) | GTWWAC | M.Rso301560ORF15260P |
| 15270 | tryptophan synthase alpha chain | |||
| 25620 | 410 aa hypothetical protein | |||
| ??? | M | M.RsoWR1ORFGP (100% identity) | M.Rso301560ORF25630P | |
| 25640 | H-NS histone | |||
| 25870 | DUF86 domain-containing protein | |||
| 25880 | M | M2.Rsp647ORF4655P (100% identity) | M1.Rso301560ORF25880P | |
| 25890 | M | M2.Rsp650ORF13700P (100% identity) | M2.Rso301560ORF25880P | |
| 25900 | 123 aa hypothetical protein | |||
| 33460 | 936 aa hypothetical protein | |||
| 33470 | M | M.RsoOE11ORF8625P (100% identity) | M.Rso301560ORF33470P | |
| 33480 | 94 aa hypothetical protein | |||
| plasmid pMAFF301560 | ||||
| 39930 | 190 aa hypothetical protein | |||
| ??? | M | M.RsoRS24ORF26795P (100% identity) | M.Rso301560ORF39940P | |
| 39960 | transposase | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 5610 | 104 aa hypothetical protein | |||
| 5620 | M | M.RsoOE11ORF22745P (100% identity) | M.Rso301560ORF5620P | |
| 5630 | R | Rps9ORF33990P (100% identity) | Rso301560ORF5620P | |
| 5640 | 210 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 210 | 85 aa hypothetical protein | |||
| 220 | R | RsoYC40MrrP (92% identity) | Rso301560MrrP | |
| 230 | 237 aa hypothetical protein | |||