Enterococcus faecium VB3338 |
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Putative Enterococcus faecium VB3338 RM systems
Ref: Balaji,V. et al. unpublished
REBASE ref # 31387
| Sequence length: | GenBank #: | |
| Chromosome: | 2,792,149 bp | CP062265 |
| plasmid pVB3338_P1: | 227,172 bp | CP062266 |
| plasmid pVB3338_P2: | 44,920 bp | CP062267 |
| plasmid pVB3338_P5: | 17,300 bp | CP062270 |
REBASE acronym: Efa3338
Org_num: 45223
All begin IG632_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 9025 | 235 aa hypothetical protein | |||
| 9030 | M | M.Ela9003ORF14870P (100% identity) | M.Efa3338ORF9030P | |
| 9035 | S | S.Efav1ORF3815P (100% identity) | S.Efa3338ORF9030P | |
| 9040 | R | Efav1ORF3815P (100% identity) | Efa3338ORF9030P | |
| 9045 | helix-turn-helix domain-containing protein | |||
| plasmid pVB3338_P1 | ||||
| 13765 | SinI family restriction endonuclease | |||
| 13770 | M | M.EfaVRE1ORF270P (100% identity) | CYYANNNNNNNTGAY | M.Efa3338ORF13770P |
| 13775 | S | S.EfaVRE1ORF270P (96% identity) | CYYANNNNNNNTGAY | S.Efa3338ORF13770P |
| 13780 | IS110 family transposase | |||
| 13785 | R | EfaVRE1ORF270P (100% identity) | CYYANNNNNNNTGAY | Efa3338ORF13770P |
| 13790 | IS6-like element IS1216 family transposase | |||
| plasmid pVB3338_P5 | ||||
| 15480 | M | M.EfasCORFAP (97% identity) | M.Efa3338ORF15480P | |
| 15485 | RNA-directed DNA polymerase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 5565 | 54 aa hypothetical protein | |||
| 5570 | M | M.Era49464ORF15900P (100% identity) | M.Efa3338ORF5570P | |
| 5575 | 96 aa hypothetical protein | |||
| plasmid pVB3338_P2 | ||||
| 14940 | recombinase family protein | |||
| 14945 | M | M.EfaB3378ORF14915P (100% identity) | M.Efa3338ORF14945P | |
| 14950 | R | EfaB3378ORF14915P (100% identity) | Efa3338ORF14945P | |
| 14955 | 122 aa hypothetical protein | |||