Chlorobium chlorochromatii CaD3 |
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Putative Chlorobium chlorochromatii CaD3 RM systems
Ref: Copeland,A. et al. unpublished
REBASE ref # 9163
Complete sequence: 2,572,079 bp
GenBank #: CP000108 (NC_007514)
REBASE acronym: Cch
Org_num: 4193
All begin Cag_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 806 | RfaE bifunctional protein, domain I | |||
| 807 | M | M.SspC3ORFAP (90% identity) | M.CchORF807P | |
| 808 | S | S.SspC3ORFAP (50% identity) | S.CchORF807P | |
| 809 | probable transposase | |||
| 810 | R | SspC3ORFAP (83% identity) | CchORF807P | |
| 811 | 213 aa conserved hypothetical protein | |||
| 1119 | Fmu, rRNA SAM-dependent methyltransferase | |||
| 1120 | M | M.CnoFORF1830P (86% identity) | M.CchORF1120P | |
| 1121 | 412 aa hypothetical protein | |||
| 1122 | S | S.Abe3393ORF22235P (35% identity) | S.CchORF1120P | |
| 1123 | 198 aa conserved hypothetical protein | |||
| 1124 | R | CnoFORF1830P (89% identity) | CchORF1120P | |
| 1125 | propionyl-CoA synthetase | |||
| 1522 | histidinol-phosphate phosphatase | |||
| 1523 | R | Din5ORF1707P (83% identity) | CchORF1525P | |
| 1524 | DNA-damage-inducible protein D | |||
| 1525 | M | M.DolHORF2725P (78% identity) | M.CchORF1525P | |
| 1526 | S | S.Spu6515ORFBP (39% identity) | S.CchORF1525AP | |
| 1527 | 199 aa conserved hypothetical protein | |||
| 1528 | S | restriction modification system, type I | S.CchORF1525BP | |
| 1529 | 192 aa conserved hypothetical protein | |||
| 1530 | S | 50 aa hypothetical protein | S.CchORF1525CP | |
| 1531 | protein translocase subunit secG | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 331 | 134 aa conserved hypothetical protein | |||
| 332 | M | M.Csp1BORF7365P (70% identity) | GGNCC | M.CchORF332P |
| 333 | R | Eol17448ORF1124P (75% identity) | GGNCC | CchORF332P |
| 334 | ATPase | |||
| 377 | 223 aa conserved hypothetical protein | |||
| 378 | RM | Cga1AORF3960P (15% identity) | CchORF378AP | |
| 379 | 344 aa conserved hypothetical protein | |||
| 380 | RM | Cga1AORF3960P (46% identity) | CchORF378BP | |
| 381 | transcriptional regulator, XRE family | |||
| 757 | adenosylcobinamide-phosphate synthase | |||
| 759 | RM | ZlaAS94ORF18435P (53% identity) | CchORF759P | |
| 760 | DEAD/DEAH box helicase-like protein | |||
| 1098 | 465 aa hypothetical protein | |||
| 1099 | M | M.CchORF1099P (100% identity) | CTAG | M.CchI |
| 1100 | R | Pin2832ORF6790P (69% identity) | CTAG | CchI |
| 1101 | transcriptional regulator | |||
| 1098 | 465 aa hypothetical protein | |||
| 1099 | M | M.CchI (100% identity) | CTAG | M.CchORF1099P |
| 1100 | 197 aa hypothetical protein | |||
| 1195 | killer suppression protein HigA, putative | |||
| 1196 | RM | CchII (100% identity) | GGARGA | CchORF1196P |
| 1197 | 84 aa conserved hypothetical protein | |||
| 1195 | killer suppression protein HigA, putative | |||
| 1196 | RM | CchORF1196P (100% identity) | GGARGA | CchII |
| 1197 | 84 aa conserved hypothetical protein | |||
| 1308 | 115 aa conserved hypothetical protein | |||
| 1309 | RM | CchIII (100% identity) | CCCAAG | CchORF1309P |
| 1310 | HNH nuclease | |||
| 1308 | 115 aa conserved hypothetical protein | |||
| 1309 | RM | CchORF1309P (100% identity) | CCCAAG | CchIII |
| 1310 | HNH nuclease | |||
| 1390 | 74 aa hypothetical protein | |||
| 1391 | R | Orh223ORF7395P (76% identity) | GTSAC | CchORF1391P |
| 1392 | M | M.FspCS20ORF14500P (76% identity) | GTSAC | M.CchORF1391P |
| 1393 | Maf-like protein | |||
| 1400 | chloride channel, putative | |||
| 1401 | R | Bgw2011ORF13P (70% identity) | CCSGG | CchORF1402P |
| 1402 | M | M.Tpu835ORF3275P (73% identity) | CCSGG | M.CchORF1402P |
| 1403 | methionyl-tRNA synthetase | |||
| 1608 | DnaB helicase | |||
| 1609 | M | M.Mar27ORF18650P (64% identity) | M.CchORF1609P | |
| 1610 | R | Asp90ORF11774P (76% identity) | GTMKAC | CchORF1609P |
| 1611 | ATPase involved in DNA repair | |||
| 1627 | 3-oxoadipate enol-lactonase, putative | |||
| 1628 | M | M.AsaSP2ORF15555P (67% identity) | GTCGAC | M.CchORF1628P |
| 1629 | 365 aa conserved hypothetical protein | |||