Citrobacter portucalensis STW0522-30 |
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Putative Citrobacter portucalensis STW0522-30 RM systems
Ref: Sekizuka,T. et al. unpublished
REBASE ref # 31386
| Sequence length: | GenBank #: | |
| Chromosome: | 4,988,881 bp | AP022399 |
| plasmid pSTW0522-30-1: | 211,224 bp | AP022400 |
| plasmid pSTW0522-30-2: | 82,100 bp | AP022401 |
| plasmid pSTW0522-30-3: | 53,035 bp | AP022402 |
REBASE acronym: Cpo52230
Org_num: 45213
All begin STW0522CIT30_, STW0522CIT30_P
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 7980 | 269 aa hypothetical protein | |||
| 7990 | R | KspRE03ORF8240P (100% identity) | Cpo52230ORF8010P | |
| 8000 | S | S.Ero90065ORF10395P (100% identity) | S.Cpo52230ORF8010P | |
| 8010 | M | M.KspRE03ORF8240P (100% identity) | M.Cpo52230ORF8010P | |
| 8020 | transcriptional regulator | |||
| 8270 | 112 aa hypothetical protein | |||
| 8280 | R | Cfr488ORF21040P (99% identity) | Cpo52230ORF8300P | |
| 8290 | S | S.KpnRGT91ORF22920P (89% identity) | S.Cpo52230ORF8300P | |
| 8300 | M | M.Esp422ORF1750P (100% identity) | M.Cpo52230ORF8300P | |
| 8310 | 621 aa hypothetical protein | |||
| 12220 | 64 aa hypothetical protein | |||
| 12230 | R | Cpo71772ORF36360P (100% identity) | Cpo52230ORF12240P | |
| 12240 | M | M.Cpo71772ORF36360P (100% identity) | M.Cpo52230ORF12240P | |
| 12250 | S | S.Cpo71772ORF36360P (33% identity) | S1.Cpo52230ORF12240P | |
| 12260 | IS30 family transposase | |||
| 12270 | S | S.Cpo71772ORF36360P (59% identity) | S2.Cpo52230ORF12240P | |
| 12280 | 207 aa hypothetical protein | |||
| 19340 | 388 aa hypothetical protein | |||
| 19350 | M | M.Cpo157ORF1943P (100% identity) | M.Cpo52230ORF19350P | |
| 19360 | S | S.Cpo157ORF1943P (100% identity) | S.Cpo52230ORF19350P | |
| 19370 | 54 aa hypothetical protein | |||
| 19380 | 153 aa hypothetical protein | |||
| 19390 | 594 aa hypothetical protein | |||
| 19400 | R | Cpo157ORF1943P (100% identity) | Cpo52230ORF19350P | |
| 19410 | metal-dependent hydrolase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 3610 | cell division protein DamX | |||
| 3620 | M | M.CpoC275DamP (100% identity) | GATC | M.Cpo52230DamP |
| 3630 | ribulose-phosphate 3-epimerase | |||
| 4530 | 54 aa hypothetical protein | |||
| 4540 | M | M.Cpo738ORF14990P (100% identity) | ATGCAT | M.Cpo52230ORF4540P |
| 4550 | DNA-binding protein Fis | |||
| 18750 | phosphohydrolase | |||
| ??? | M | M.Cpo157ORF1885P (100% identity) | CCWGG | M.Cpo52230ORF18760P |
| 18770 | V | V.Cpo5ORF3235P (100% identity) | V.Cpo52230ORF18760P | |
| 18780 | drug/metabolite exporter YedA | |||
| 20520 | 85 aa hypothetical protein | |||
| 20530 | M | M.Cpo71736ORF20020P (100% identity) | M.Cpo52230ORF20530P | |
| 20540 | DNA damage-inducible protein I | |||
| 28680 | 204 aa hypothetical protein | |||
| 28690 | M | M.Cpo71772ORF20120P (100% identity) | M.Cpo52230ORF28690P | |
| 28700 | crossover junction endodeoxyribonuclease RuvA | |||
| 40770 | IS5 family transposase | |||
| 40780 | M | M.Cpo71736DndC2P (100% identity) | M.Cpo52230DndCP | |
| 40790 | 666 aa hypothetical protein | |||
| 40780 | 212 aa hypothetical protein | |||
| 40790 | M | M.Cpo71736DndDP (100% identity) | M.Cpo52230DndDP | |
| 40800 | 118 aa hypothetical protein | |||
| 40790 | 666 aa hypothetical protein | |||
| 40800 | M | M.Cpo71736DndEP (100% identity) | M.Cpo52230DndEP | |
| 40810 | 386 aa hypothetical protein | |||
| 40820 | 170 aa hypothetical protein | |||
| 40830 | R | Cpo71736DptHP (100% identity) | Cpo52230DptHP | |
| 40840 | IS5 family transposase | |||
| 40840 | IS5 family transposase | |||
| 40850 | R | Cpo71736DptH2P (100% identity) | Cpo52230DptH2P | |
| 40860 | 441 aa hypothetical protein | |||
| 40850 | 1429 aa hypothetical protein | |||
| 40860 | R | Cpo71736DptGP (100% identity) | Cpo52230DptGP | |
| 40870 | 549 aa hypothetical protein | |||
| 40860 | 441 aa hypothetical protein | |||
| 40870 | R | Cpo71736DptFP (100% identity) | Cpo52230DptFP | |
| 40880 | 62 aa hypothetical protein | |||
| plasmid pSTW0522-30-1 | ||||
| 10450 | 120 aa hypothetical protein | |||
| 10460 | M | M.Vch11614ORFCP (100% identity) | M.Cpo52230ORF10460P | |
| 10470 | 149 aa hypothetical protein | |||
| 11130 | 100 aa hypothetical protein | |||
| 11140 | M | M.YrupYR1ORFCP (100% identity) | M.Cpo52230ORF11140P | |
| 11150 | 143 aa hypothetical protein | |||
| plasmid pSTW0522-30-2 | ||||
| 20380 | 66 aa hypothetical protein | |||
| 20390 | M | M.Easm20ORF23685P (100% identity) | M.Cpo52230ORF20390P | |
| 20400 | 74 aa hypothetical protein | |||
| plasmid pSTW0522-30-3 | ||||
| 30090 | 76 aa hypothetical protein | |||
| 30100 | M | M.SmaBWH35ORF25885P (100% identity) | M.Cpo52230ORF30100P | |
| 30110 | 73 aa hypothetical protein | |||