Citrobacter portucalensis STW0522-27 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Citrobacter portucalensis STW0522-27 RM systems
Ref: Sekizuka,T. et al. unpublished
REBASE ref # 31386
| Sequence length: | GenBank #: | |
| Chromosome: | 5,040,467 bp | AP022394 |
| plasmid pSTW0522-27-1: | 211,235 bp | AP022395 |
| plasmid pSTW0522-27-3: | 82,401 bp | AP022397 |
REBASE acronym: Cpo52227
Org_num: 45212
All begin STW0522CIT27_, STW0522CIT27_P
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 33990 | 207 aa hypothetical protein | |||
| 34000 | S | S.Cpo71772ORF36360P (100% identity) | S.Cpo52227ORF34010P | |
| 34010 | M | M.Cpo71772ORF36360P (100% identity) | M.Cpo52227ORF34010P | |
| 34020 | R | Cpo71772ORF36360P (100% identity) | Cpo52227ORF34010P | |
| 34030 | 64 aa hypothetical protein | |||
| 36090 | 56 aa hypothetical protein | |||
| 36100 | R | Cpo71772ORF10240BP (100% identity) | Cpo52227ORF36160BP | |
| 36120 | R | Cpo71772ORF10240AP (100% identity) | Cpo52227ORF36160AP | |
| 36130 | 305 aa hypothetical protein | |||
| ??? | S | S2.Cpo71772ORF10240P (100% identity) | S2.Cpo52227ORF36160P | |
| 36140 | IS30 family transposase | |||
| 36150 | S | S1.Cpo71772ORF10240P (100% identity) | S1.Cpo52227ORF36160P | |
| 36160 | M | M.SenS12VPHORF19925P (100% identity) | M.Cpo52227ORF36160P | |
| 36170 | 291 aa hypothetical protein | |||
| 38330 | transcriptional regulator | |||
| 38340 | M | M.KspRE03ORF8240P (100% identity) | M.Cpo52227ORF38340P | |
| 38350 | 38 aa hypothetical protein | |||
| 38360 | transposase | |||
| 38370 | 88 aa hypothetical protein | |||
| 38380 | 283 aa hypothetical protein | |||
| 38390 | S | S.Ero90065ORF10395P (92% identity) | S.Cpo52227ORF38340P | |
| 38400 | R | KspRE03ORF8240P (100% identity) | R1.Cpo52227ORF38340P | |
| 38410 | 66 aa hypothetical protein | |||
| 38420 | 88 aa hypothetical protein | |||
| 38430 | 283 aa hypothetical protein | |||
| 38440 | 88 aa hypothetical protein | |||
| 38450 | 206 aa hypothetical protein | |||
| 38460 | IS5 family transposase | |||
| 38470 | 131 aa hypothetical protein | |||
| 38480 | R | Cpo71772ORF7780P (100% identity) | R2.Cpo52227ORF38340P | |
| 38490 | 112 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 3450 | cell division protein DamX | |||
| 3460 | M | M.CpoC275DamP (100% identity) | GATC | M.Cpo52227DamP |
| 3470 | ribulose-phosphate 3-epimerase | |||
| 4420 | 54 aa hypothetical protein | |||
| 4430 | M | M.Cpo738ORF14990P (100% identity) | ATGCAT | M.Cpo52227ORF4430P |
| 4440 | DNA-binding protein Fis | |||
| 14180 | 72 aa hypothetical protein | |||
| 14190 | M | M.Cpo71772ORF33650P (100% identity) | M.Cpo52227ORF14190P | |
| 14200 | 50 aa hypothetical protein | |||
| 17980 | phosphohydrolase | |||
| ??? | M | M.Cpo71772ORF29710P (100% identity) | CCWGG | M.Cpo52227ORF17990P |
| 18000 | V | V.CpoK218ORF11815P (100% identity) | V.Cpo52227ORF17990P | |
| 18010 | drug/metabolite exporter YedA | |||
| 19400 | 85 aa hypothetical protein | |||
| 19410 | M | M.Cpo71736ORF20020P (100% identity) | M.Cpo52227ORF19410P | |
| 19420 | DNA damage-inducible protein I | |||
| 27660 | 204 aa hypothetical protein | |||
| 27670 | M | M.Cpo71772ORF20120P (100% identity) | M.Cpo52227ORF27670P | |
| 27680 | crossover junction endodeoxyribonuclease RuvA | |||
| 40800 | IS5 family transposase | |||
| 40810 | M | M.Cpo71736DndC2P (100% identity) | M.Cpo52227DndCP | |
| 40820 | 223 aa hypothetical protein | |||
| 40810 | 212 aa hypothetical protein | |||
| 40820 | M | M.Cpo71736DndDP (31% identity) | M.Cpo52227DndDP | |
| 40830 | IS5 family transposase | |||
| 40830 | IS5 family transposase | |||
| 40840 | R | Cpo71736DptGP (76% identity) | Cpo52227DptGP | |
| 40850 | 1429 aa hypothetical protein | |||
| 40840 | 353 aa hypothetical protein | |||
| 40850 | R | Cpo71736DptH2P (100% identity) | Cpo52227DptHP | |
| 40860 | IS5 family transposase | |||
| 40860 | IS5 family transposase | |||
| 40870 | R | Cpo71736DptGP (23% identity) | Cpo52227DptG2P | |
| 40880 | 406 aa hypothetical protein | |||
| 40870 | 113 aa hypothetical protein | |||
| 40880 | R | Cpo71736DptFP (73% identity) | Cpo52227DptFP | |
| 40890 | IS5 family transposase | |||
| plasmid pSTW0522-27-1 | ||||
| 11330 | 143 aa hypothetical protein | |||
| 11340 | M | M.YrupYR1ORFCP (100% identity) | M.Cpo52227ORF11340P | |
| 11350 | 100 aa hypothetical protein | |||
| 12010 | 149 aa hypothetical protein | |||
| 12020 | M | M.Vch11614ORFCP (100% identity) | M.Cpo52227ORF12020P | |
| 12030 | 120 aa hypothetical protein | |||
| plasmid pSTW0522-27-3 | ||||
| 30370 | 66 aa hypothetical protein | |||
| 30380 | M | M.Easm20ORF23685P (100% identity) | M.Cpo52227ORF30380P | |
| 30390 | 74 aa hypothetical protein | |||