Ref: Sekizuka,T. et al. unpublished

REBASE ref # 31386

Sequence length:GenBank #:
Chromosome: 5,040,467 bp AP022394
plasmid pSTW0522-27-1: 211,235 bp AP022395
plasmid pSTW0522-27-3: 82,401 bp AP022397

REBASE acronym: Cpo52227

Org_num: 45212

 

All begin STW0522CIT27_, STW0522CIT27_P

Type I
ORF Gene Most similar Specificity Name
 
Chromosome
 
33990 207 aa hypothetical protein
34000 S S.Cpo71772ORF36360P (100% identity) S.Cpo52227ORF34010P
34010 M M.Cpo71772ORF36360P (100% identity) M.Cpo52227ORF34010P
34020 R Cpo71772ORF36360P (100% identity) Cpo52227ORF34010P
34030 64 aa hypothetical protein
 
36090 56 aa hypothetical protein
36100 R Cpo71772ORF10240BP (100% identity) Cpo52227ORF36160BP
36120 R Cpo71772ORF10240AP (100% identity) Cpo52227ORF36160AP
36130 305 aa hypothetical protein
??? S S2.Cpo71772ORF10240P (100% identity) S2.Cpo52227ORF36160P
36140 IS30 family transposase
36150 S S1.Cpo71772ORF10240P (100% identity) S1.Cpo52227ORF36160P
36160 M M.SenPP122ORF4660P (100% identity) M.Cpo52227ORF36160P
36170 291 aa hypothetical protein
 
38330 transcriptional regulator
38340 M M.KspRE03ORF8240P (100% identity) M.Cpo52227ORF38340P
38350 38 aa hypothetical protein
38360 transposase
38370 88 aa hypothetical protein
38380 283 aa hypothetical protein
38390 S S.Ero90065ORF10395P (92% identity) S.Cpo52227ORF38340P
38400 R KspRE03ORF8240P (100% identity) R1.Cpo52227ORF38340P
38410 66 aa hypothetical protein
38420 88 aa hypothetical protein
38430 283 aa hypothetical protein
38440 88 aa hypothetical protein
38450 206 aa hypothetical protein
38460 IS5 family transposase
38470 131 aa hypothetical protein
38480 R Cpo71772ORF7780P (100% identity) R2.Cpo52227ORF38340P
38490 112 aa hypothetical protein
Type II
ORF Gene Most similar Specificity Name
 
Chromosome
 
3450 cell division protein DamX
3460 M M.CpoC275DamP (100% identity) GATC M.Cpo52227DamP
3470 ribulose-phosphate 3-epimerase
 
4420 54 aa hypothetical protein
4430 M M.Cpo738ORF14990P (100% identity) ATGCAT M.Cpo52227ORF4430P
4440 DNA-binding protein Fis
 
14180 72 aa hypothetical protein
14190 M M.Cpo71772ORF33650P (100% identity) M.Cpo52227ORF14190P
14200 50 aa hypothetical protein
 
17980 phosphohydrolase
??? M M.Cpo71772ORF29710P (100% identity) CCWGG M.Cpo52227ORF17990P
18000 V V.CpoK218ORF11815P (100% identity) V.Cpo52227ORF17990P
18010 drug/metabolite exporter YedA
 
19400 85 aa hypothetical protein
19410 M M.Cpo71736ORF20020P (100% identity) M.Cpo52227ORF19410P
19420 DNA damage-inducible protein I
 
27660 204 aa hypothetical protein
27670 M M.Cpo71772ORF20120P (100% identity) M.Cpo52227ORF27670P
27680 crossover junction endodeoxyribonuclease RuvA
 
40800 IS5 family transposase
40810 M M.Cpo71736DndC2P (100% identity) M.Cpo52227DndCP
40820 223 aa hypothetical protein
 
40810 212 aa hypothetical protein
40820 M M.Cpo71736DndDP (31% identity) M.Cpo52227DndDP
40830 IS5 family transposase
 
40830 IS5 family transposase
40840 R Cpo71736DptGP (76% identity) Cpo52227DptGP
40850 1429 aa hypothetical protein
 
40840 353 aa hypothetical protein
40850 R Cpo71736DptH2P (100% identity) Cpo52227DptHP
40860 IS5 family transposase
 
40860 IS5 family transposase
40870 R Cpo71736DptGP (23% identity) Cpo52227DptG2P
40880 406 aa hypothetical protein
 
40870 113 aa hypothetical protein
40880 R Cpo71736DptFP (73% identity) Cpo52227DptFP
40890 IS5 family transposase
 
plasmid pSTW0522-27-1
 
11330 143 aa hypothetical protein
11340 M M.YrupYR1ORFCP (100% identity) M.Cpo52227ORF11340P
11350 100 aa hypothetical protein
 
12010 149 aa hypothetical protein
12020 M M.Vch11614ORFCP (100% identity) M.Cpo52227ORF12020P
12030 120 aa hypothetical protein
 
plasmid pSTW0522-27-3
 
30370 66 aa hypothetical protein
30380 M M.Eas0468ORF26360P (100% identity) M.Cpo52227ORF30380P
30390 74 aa hypothetical protein