Citrobacter portucalensis STW0522-26 |
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Putative Citrobacter portucalensis STW0522-26 RM systems
Ref: Sekizuka,T. et al. unpublished
REBASE ref # 31386
| Sequence length: | GenBank #: | |
| Chromosome: | 5,126,826 bp | AP022389 |
| plasmid pSTW0522-26-1: | 146,977 bp | AP022390 |
REBASE acronym: Cpo52226
Org_num: 45211
All begin STW0522CIT26_, STW0522CIT26_P
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 7830 | 112 aa hypothetical protein | |||
| 7840 | R | Cpo71772ORF7780P (100% identity) | Cpo52226ORF7860P | |
| 7850 | S | S1.Cpo71772ORF7780P (70% identity) | S.Cpo52226ORF7860P | |
| 7860 | M | M.Cko10769I (98% identity) | M.Cpo52226ORF7860P | |
| 7870 | 621 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 3120 | cell division protein DamX | |||
| 3130 | M | M.CpoC275DamP (100% identity) | GATC | M.Cpo52226DamP |
| 3140 | ribulose-phosphate 3-epimerase | |||
| 4390 | 54 aa hypothetical protein | |||
| 4400 | M | M.Cpo738ORF14990P (100% identity) | ATGCAT | M.Cpo52226ORF4400P |
| 4410 | DNA-binding protein Fis | |||
| 12020 | bacteriophage lambda NinG | |||
| 12030 | M | M.Cpo71727ORF11610P (100% identity) | M.Cpo52226ORF12030P | |
| 12040 | antitermination protein | |||
| 18380 | ATPase | |||
| 18390 | M | M.Csp212ORF8285P (100% identity) | M.Cpo52226ORF18390P | |
| 18400 | integrase | |||
| 18930 | phosphohydrolase | |||
| ??? | M | M.Cpo71772ORF29710P (100% identity) | CCWGG | M.Cpo52226ORF18940P |
| 18950 | V | V.CpoK218ORF11815P (100% identity) | V.Cpo52226ORF18940P | |
| 18960 | drug/metabolite exporter YedA | |||
| 20360 | 85 aa hypothetical protein | |||
| 20370 | M | M.Cpo71736ORF20020P (100% identity) | M.Cpo52226ORF20370P | |
| 20380 | DNA damage-inducible protein I | |||
| 28170 | 204 aa hypothetical protein | |||
| 28180 | M | M.Cpo71727ORF28170P (100% identity) | M.Cpo52226ORF28180P | |
| 28190 | crossover junction endodeoxyribonuclease RuvA | |||
| 31750 | 65 aa hypothetical protein | |||
| 31760 | M | M.EbaW6ORF21330P (89% identity) | M.Cpo52226ORF31760P | |
| 31770 | 77 aa hypothetical protein | |||
| 41270 | 108 aa hypothetical protein | |||
| 41280 | M | M.Cpo71736DndBP (100% identity) | M.Cpo52226DndBP | |
| 41290 | 540 aa hypothetical protein | |||
| 41280 | 361 aa hypothetical protein | |||
| 41290 | M | M.Cpo71727DndCP (99% identity) | M.Cpo52226DndCP | |
| ??? | Sulphur transferase DndC, putative | |||
| 41290 | 540 aa hypothetical protein | |||
| ??? | M | M.Cpo71727DndDP (100% identity) | M.Cpo52226DndDP | |
| 41320 | 118 aa hypothetical protein | |||
| ??? | Sulphur transferase DndC, putative | |||
| 41320 | M | M.Cpo71736DndEP (100% identity) | M.Cpo52226DndEP | |
| 41330 | 386 aa hypothetical protein | |||
| 41340 | 170 aa hypothetical protein | |||
| 41350 | R | Cpo71727DptHP (100% identity) | Cpo52226DptHP | |
| 41360 | 441 aa hypothetical protein | |||
| 41350 | 1687 aa hypothetical protein | |||
| 41360 | R | Cpo71736DptGP (100% identity) | Cpo52226DptGP | |
| 41370 | 406 aa hypothetical protein | |||
| 41360 | 441 aa hypothetical protein | |||
| 41370 | R | Cpo71736DptFP (73% identity) | Cpo52226DptFP | |
| 41380 | 125 aa hypothetical protein | |||
| 41390 | 71 aa hypothetical protein | |||
| 41400 | R | Cpo71727DptF2P (100% identity) | Cpo52226DptF2P | |
| 41410 | 62 aa hypothetical protein | |||
| 41560 | 46 aa hypothetical protein | |||
| 41570 | R | KquMMCC7ORF22430P (100% identity) | Cpo52226ORF41580P | |
| 41580 | M | M.Eko52260ORF6510P (100% identity) | M.Cpo52226ORF41580P | |
| 41590 | 50 aa hypothetical protein | |||
| plasmid pSTW0522-26-1 | ||||
| 10450 | 120 aa hypothetical protein | |||
| 10460 | M | M.Vch11614ORFCP (100% identity) | M.Cpo52226ORF10460P | |
| 10470 | 149 aa hypothetical protein | |||
| 11190 | 100 aa hypothetical protein | |||
| 11200 | M | M.YrupYR1ORFCP (100% identity) | M.Cpo52226ORF11200P | |
| 11210 | 143 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 29060 | 509 aa hypothetical protein | |||
| 29070 | R | Cpo71772ORF19280P (100% identity) | GCGCAG | Cpo52226ORF29080P |
| 29080 | M | M.Cpo71772ORF19280P (100% identity) | GCGCAG | M.Cpo52226ORF29080P |
| 29090 | 462 aa hypothetical protein | |||