Flavobacterium columnare FCO-F9 |
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Putative Flavobacterium columnare FCO-F9 RM systems
Ref: Kunttu,H. et al. unpublished
REBASE ref # 31401
Complete sequence: 3,261,270 bp
GenBank #: CP054518
REBASE acronym: FcoFCOF9
Org_num: 45305
All begin HUE29_
| Type II | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 685 | copper resistance protein NlpE N-terminal | |||
| 690 | R | R1.FcoF9S17ORF695P (100% identity) | GAATTC | R1.FcoFCOF9ORF695P |
| 695 | M | M.FcoFC4ORF1490P (100% identity) | GAATTC | M.FcoFCOF9ORF695P |
| ??? | R | R2.FcoF9R61ORF695P (100% identity) | GAATTC | R2.FcoFCOF9ORF695P |
| 705 | tyrosine-type recombinase/integrase | |||
| 1715 | thymidylate synthase | |||
| 1720 | M | M.FcoF9S17ORF1720P (100% identity) | M.FcoFCOF9ORF1720P | |
| 1725 | S9 family peptidase | |||
| 2735 | 397 aa hypothetical protein | |||
| 2740 | M | M1.FcoF9S17ORF2740P (100% identity) | M1.FcoFCOF9ORF2740P | |
| 2745 | M | M2.FcoF9S17ORF2740P (100% identity) | M2.FcoFCOF9ORF2740P | |
| 2750 | 228 aa hypothetical protein | |||
| 5195 | 151 aa hypothetical protein | |||
| 5200 | C | C.FcoF9S17ORF5205P (100% identity) | C.FcoFCOF9ORF5205P | |
| 5205 | M | M.FcoF9S17ORF5205P (100% identity) | M.FcoFCOF9ORF5205P | |
| 5210 | DUF3883 domain-containing protein | |||
| 5215 | 83 aa hypothetical protein | |||
| 5220 | DNA damage-inducible protein D | |||
| 5225 | R | FcoF9S17ORF5205P (100% identity) | FcoFCOF9ORF5205P | |
| 5230 | 87 aa hypothetical protein | |||
| 5855 | transposase | |||
| 5860 | C | C.FcoF9S17ORF5865P (100% identity) | C.FcoFCOF9ORF5870P | |
| 5865 | R | FcoF9S17ORF5865P (100% identity) | FcoFCOF9ORF5870P | |
| 5870 | M | M.FcoF9S17ORF5865P (100% identity) | M.FcoFCOF9ORF5870P | |
| 5875 | IS1182 family transposase | |||
| 6425 | methylmalonyl-CoA mutase | |||
| 6430 | C | C.FcoF9S17ORF6430P (100% identity) | C.FcoFCOF9ORF6435P | |
| 6435 | M | M.FcoF9S17ORF6430P (100% identity) | M.FcoFCOF9ORF6435P | |
| 6440 | R | FcoFC4ORF11145P (100% identity) | FcoFCOF9ORF6435P | |
| 6445 | transposase | |||
| 6505 | Gfo/Idh/MocA family oxidoreductase | |||
| 6510 | M | M.FcoF9S17ORF6505P (100% identity) | M.FcoFCOF9ORF6510P | |
| 6515 | R | FcoF9S17ORF6505P (100% identity) | FcoFCOF9ORF6510P | |
| 6520 | DUF1016 domain-containing protein | |||
| 6515 | NgoPII family restriction endonuclease | |||
| 6520 | S | S1.TfiFM3FORF5580P (62% identity) | S.FcoFCOF9ORF6520P | |
| 6525 | 3-hydroxybutyryl-CoA dehydrogenase | |||
| 10010 | 206 aa hypothetical protein | |||
| 10015 | RM | FcoF9S17ORF10010P (100% identity) | GCVGAG | FcoFCOF9ORF10015P |
| 10020 | 2-oxoglutarate dehydrogenase complex | |||
| 10690 | 139 aa hypothetical protein | |||
| 10695 | M | M.FcoF9S17ORF10690P (100% identity) | M.FcoFCOF9ORF10695P | |
| 10700 | 319 aa hypothetical protein | |||