Neisseria gonorrhoeae SW0274 |
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Putative Neisseria gonorrhoeae SW0274 RM systems
Ref: Iyer,M.S. et al. unpublished
REBASE ref # 31417
Complete sequence: 2,147,987 bp
GenBank #: CP061483
REBASE acronym: NgoSW0274
Org_num: 45348
All begin IBX84_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 2070 | ADP-glyceromanno-heptose 6-epimerase | |||
| 2075 | M | M.Ngos1291ORF7750P (100% identity) | M.NgoSW0274ORF2075P | |
| 2080 | DNA damage-inducible protein D | |||
| 2085 | S | S1.NgoWOORF429P (98% identity) | GCANNNNNNNNTGC | S1.NgoSW0274ORF2075P |
| 2090 | S | S2.NgoSW0223ORF2075P (100% identity) | GCANNNNNNNNTGC | S2.NgoSW0274ORF2075P |
| 2095 | R | NgoSW0002ORF2090P (99% identity) | NgoSW0274ORF2075P | |
| 2100 | ATP-dependent Clp protease ATP-binding subunit | |||
| 3555 | replication-associated recombination protein A | |||
| 3560 | R | NgoJH14ORFGP (99% identity) | GAGNNNNNTAC | NgoSW0274ORF3585P |
| 3565 | hydroxyacid dehydrogenase | |||
| 3570 | S | S.NgoSW0002ORF3605P (100% identity) | GAGNNNNNTAC | S.NgoSW0274ORF3585P |
| 3575 | 186 aa hypothetical protein | |||
| 3580 | 280 aa hypothetical protein | |||
| 3585 | M | M.NgoJH14ORFMP (99% identity) | GAGNNNNNTAC | M.NgoSW0274ORF3585P |
| 3590 | ABC transporter | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 30 | leucine--tRNA ligase | |||
| ??? | R | NgoSW0259ORF40P (100% identity) | GATC | NgoSW0274ORF40P |
| 45 | site-specific DNA-methyltransferase | |||
| 40 | restriction endonuclease | |||
| ??? | M | M.NgoSW0236ORF45P (99% identity) | M.NgoSW0274ORF45P | |
| 55 | 184 aa hypothetical protein | |||
| 1545 | phenylalanine--tRNA ligase subunit alpha | |||
| 1550 | V | V.NgoWSORF391P (100% identity) | V.NgoSW0274ORF1550P | |
| 1555 | M | M.NgoSW0015ORF1555P (100% identity) | M.NgoSW0274ORF1550P | |
| 1560 | 81 aa hypothetical protein | |||
| 1565 | R | NgoSW0032ORF1550P (100% identity) | NgoSW0274ORF1550P | |
| 1570 | phenylalanine--tRNA ligase subunit beta | |||
| 1835 | IS1595 family transposase | |||
| 1840 | RM | Ngos1291ORF7515P (100% identity) | GACNNNNNTGA | NgoSW0274ORF1840P |
| 1845 | S | S.NgoWSORF450P (100% identity) | GACNNNNNTGA | S.NgoSW0274ORF1840P |
| 1850 | 140 aa hypothetical protein | |||
| 1870 | uroporphyrinogen decarboxylase | |||
| 1875 | H | H.Ngos1291ORF7560P (99% identity) | H.NgoSW0274ORF1885P | |
| 1880 | R | Ngos1291ORF7560P (100% identity) | GCSGC | NgoSW0274ORF1885P |
| 1885 | M | M.Ngos1291ORF7560P (100% identity) | GCSGC | M.NgoSW0274ORF1885P |
| 1890 | DNA repair protein RadA | |||
| 3445 | 3-isopropylmalate dehydrogenase | |||
| 3450 | R | NgoSW0032ORF3440P (100% identity) | GGNNCC | NgoSW0274ORF3455P |
| 3455 | M | M.NmeMBW2ORFJP (100% identity) | GGNNCC | M.NgoSW0274ORF3455P |
| 3460 | 3-isopropylmalate dehydratase small subunit | |||
| 4420 | anthranilate synthase component I | |||
| 4425 | M | M.NgoSW0259ORF4400P (100% identity) | GCCGGC | M.NgoSW0274ORF4425P |
| 4430 | R | Ngos1291ORF10080P (100% identity) | GCCGGC | NgoSW0274ORF4425P |
| 4435 | 5-(carboxyamino)imidazole ribonucleotide | |||
| 5850 | replication initiation factor domain-containing | |||
| 5855 | V | V.Ngos1291ORF65P (100% identity) | V.NgoSW0274ORF5865P | |
| 5860 | R | Ngos1291ORF65P (100% identity) | NgoSW0274ORF5865P | |
| ??? | M | M.Ngos1291ORF65P (100% identity) | M.NgoSW0274ORF5865P | |
| 5875 | 48 aa hypothetical protein | |||
| 6060 | excinuclease ABC subunit UvrA | |||
| 6065 | R | Ngos1291ORF260P (100% identity) | CCGCGG | NgoSW0274ORF6070P |
| 6070 | M | M.Ngos1291ORF260P (100% identity) | CCGCGG | M.NgoSW0274ORF6070P |
| 6075 | transposase | |||
| 9090 | FUSC family protein | |||
| 9095 | R | NgoSW0223ORF9065P (99% identity) | GGCC | NgoSW0274ORF9100P |
| 9100 | M | M.NgoSW0223ORF9065P (100% identity) | GGCC | M.NgoSW0274ORF9100P |
| 9105 | ribosome recycling factor | |||
| 9640 | 93 aa hypothetical protein | |||
| 9645 | R | NgoWSIIIP (100% identity) | GGTGA | NgoSW0274ORF9650P |
| 9650 | M | M1.NgoSW0259ORF9605P (99% identity) | GGTGA | M1.NgoSW0274ORF9650P |
| 9655 | M | M1.NgoWSIII (100% identity) | GGTGA | M2.NgoSW0274ORF9650P |
| 9660 | RNA-binding transcriptional accessory protein | |||
| 10175 | GTPase ObgE | |||
| 10180 | M | M.NgoWFORF2310P (100% identity) | RGCGCY | M.NgoSW0274ORF10180P |
| 10185 | R | Ngos1291ORF4640P (100% identity) | RGCGCY | NgoSW0274ORF10180P |
| 10190 | cysteine--tRNA ligase | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2780 | peptidyl-prolyl cis-trans isomerase | |||
| ??? | M | M.NmeA710ORF1383P (85% identity) | M.NgoSW0274ORF2785P | |
| 2795 | tRNA 2-thiocytidine(32) synthetase TtcA | |||
| 3250 | alpha-hydroxy-acid oxidizing protein | |||
| 3255 | R | NgoSH240ORFJP (99% identity) | NgoSW0274ORF3260P | |
| ??? | M | M.NgoWMORF1085P (98% identity) | M.NgoSW0274ORF3260P | |
| 3275 | tRNA pseudouridine(55) synthase TruB | |||