Ref: Iyer,M.S. et al. unpublished

REBASE ref # 31417

Complete sequence: 2,150,148 bp

GenBank #: CP061484

REBASE acronym: NgoSW0259

Org_num: 45347

 

All begin IBX83_

Type I
ORF Gene Most similar Specificity Name
 
2060 ADP-glyceromanno-heptose 6-epimerase
2065 M M.Ngos1291ORF7750P (100% identity) M.NgoSW0259ORF2065P
2070 DNA damage-inducible protein D
2075 S S1.NgoWSII (100% identity) GCANNNNNNNNTGC S1.NgoSW0259ORF2065P
2080 S S2.NgoWSII (100% identity) GCANNNNNNNNTGC S2.NgoSW0259ORF2065P
2085 R NgoN160ORF2075P (99% identity) NgoSW0259ORF2065P
2090 ATP-dependent Clp protease ATP-binding subunit
 
3530 replication-associated recombination protein A
3535 R NgoSW0223ORF3575P (99% identity) GAGNNNNNTAC NgoSW0259ORF3560P
3540 hydroxyacid dehydrogenase
3545 S S.NgoWSI (100% identity) GAGNNNNNTAC S.NgoSW0259ORF3560P
3550 186 aa hypothetical protein
3555 280 aa hypothetical protein
3560 M M.Ngos1291I (100% identity) GAGNNNNNTAC M.NgoSW0259ORF3560P
3565 ABC transporter
Type II
ORF Gene Most similar Specificity Name
 
30 leucine--tRNA ligase
??? R NgoSW0274ORF40P (100% identity) GATC NgoSW0259ORF40P
45 site-specific DNA-methyltransferase
 
40 restriction endonuclease
45 M M.Ngos1291ORF5755P (100% identity) M.NgoSW0259ORF45P
50 184 aa hypothetical protein
 
1530 phenylalanine--tRNA ligase subunit alpha
1535 V V.NgoWSORF391P (100% identity) V.NgoSW0259ORF1540P
1540 M M.Ngos1291ORF7230P (100% identity) M.NgoSW0259ORF1540P
1545 81 aa hypothetical protein
1550 R NgoWSORF391P (100% identity) NgoSW0259ORF1540P
1555 phenylalanine--tRNA ligase subunit beta
 
1825 IS1595 family transposase
1830 RM NgoSW0223ORF1840P (100% identity) GACNNNNNTGA NgoSW0259ORF1830P
1835 S S.Ngos1291ORF7515P (100% identity) GACNNNNNTGA S.NgoSW0259ORF1830P
1840 140 aa hypothetical protein
 
1860 uroporphyrinogen decarboxylase
1865 H H.Ngos1291ORF7560P (100% identity) H.NgoSW0259ORF1875P
1870 R Ngos1291ORF7560P (100% identity) GCSGC NgoSW0259ORF1875P
1875 M M.Ngos1291ORF7560P (100% identity) GCSGC M.NgoSW0259ORF1875P
??? 92 aa hypothetical protein TUM15762_01470
 
3420 3-isopropylmalate dehydrogenase
3425 R NgoWSORF784P (100% identity) GGNNCC NgoSW0259ORF3430P
3430 M M.NmeMBW2ORFJP (100% identity) GGNNCC M.NgoSW0259ORF3430P
3435 3-isopropylmalate dehydratase small subunit
 
4395 anthranilate synthase component I
4400 M M.NgoSW0274ORF4425P (100% identity) GCCGGC M.NgoSW0259ORF4400P
4405 R Ngos1291ORF10080P (100% identity) GCCGGC NgoSW0259ORF4400P
4410 5-(carboxyamino)imidazole ribonucleotide
 
5805 replication initiation factor domain-containing
5810 V V.Ngos1291ORF65P (100% identity) V.NgoSW0259ORF5820P
5815 R Ngos1291ORF65P (100% identity) NgoSW0259ORF5820P
??? M M.Ngos1291ORF65P (100% identity) M.NgoSW0259ORF5820P
5830 type IV pilin protein
 
6005 excinuclease ABC subunit UvrA
6010 R Ngos1291ORF260P (100% identity) CCGCGG NgoSW0259ORF6015P
6015 M M.Ngos1291ORF260P (99% identity) CCGCGG M.NgoSW0259ORF6015P
6020 transposase
 
9050 FUSC family protein
9055 R NgoSW0236ORF9080P (99% identity) GGCC NgoSW0259ORF9060P
9060 M M.Ngos1291ORF3515P (100% identity) GGCC M.NgoSW0259ORF9060P
9065 ribosome recycling factor
 
9595 93 aa hypothetical protein
9600 R NgoWSIIIP (100% identity) GGTGA NgoSW0259ORF9605P
9605 M M1.NgoSW0236ORF9630P (100% identity) GGTGA M1.NgoSW0259ORF9605P
9610 M M2.Ngos1291II (100% identity) GGTGA M2.NgoSW0259ORF9605P
9615 RNA-binding transcriptional accessory protein
 
10135 GTPase ObgE
10140 M M.NgoSW0018ORF10195P (99% identity) RGCGCY M.NgoSW0259ORF10140P
10145 R Ngos1291ORF4640P (99% identity) RGCGCY NgoSW0259ORF10140P
10150 cysteine--tRNA ligase
Type III
ORF Gene Most similar Specificity Name
 
2765 peptidyl-prolyl cis-trans isomerase
2770 M M.NgoSW0223ORF2790P (98% identity) CCACC M.NgoSW0259ORF2770P
2775 R Ngos1291ORF8455P (100% identity) CCACC NgoSW0259ORF2770P
2780 tRNA 2-thiocytidine(32) synthetase TtcA
 
3225 alpha-hydroxy-acid oxidizing protein
3230 R Ngos1291ORF8930P (100% identity) NgoSW0259ORF3235P
3235 M M.NgoNG250ORF5080P (100% identity) M.NgoSW0259ORF3235P
3240 48 aa hypothetical protein
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