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Putative Neisseria gonorrhoeae SW0259 RM systems
Ref: Iyer,M.S. et al. unpublished
REBASE ref # 31417
Complete sequence: 2,150,148 bp
GenBank #: CP061484
REBASE acronym: NgoSW0259
Org_num: 45347
All begin IBX83_
Type I | ||||
---|---|---|---|---|
ORF | Gene | Most similar | Specificity | Name |
2060 | ADP-glyceromanno-heptose 6-epimerase | |||
2065 | M | M.Ngos1291ORF7750P (100% identity) | M.NgoSW0259ORF2065P | |
2070 | DNA damage-inducible protein D | |||
2075 | S | S1.NgoWSII (100% identity) | GCANNNNNNNNTGC | S1.NgoSW0259ORF2065P |
2080 | S | S2.NgoWSII (100% identity) | GCANNNNNNNNTGC | S2.NgoSW0259ORF2065P |
2085 | R | NgoN160ORF2075P (99% identity) | NgoSW0259ORF2065P | |
2090 | ATP-dependent Clp protease ATP-binding subunit | |||
3530 | replication-associated recombination protein A | |||
3535 | R | NgoSW0223ORF3575P (99% identity) | GAGNNNNNTAC | NgoSW0259ORF3560P |
3540 | hydroxyacid dehydrogenase | |||
3545 | S | S.NgoWSI (100% identity) | GAGNNNNNTAC | S.NgoSW0259ORF3560P |
3550 | 186 aa hypothetical protein | |||
3555 | 280 aa hypothetical protein | |||
3560 | M | M.Ngos1291I (100% identity) | GAGNNNNNTAC | M.NgoSW0259ORF3560P |
3565 | ABC transporter | |||
Type II | ||||
ORF | Gene | Most similar | Specificity | Name |
30 | leucine--tRNA ligase | |||
??? | R | NgoSW0274ORF40P (100% identity) | GATC | NgoSW0259ORF40P |
45 | site-specific DNA-methyltransferase | |||
40 | restriction endonuclease | |||
45 | M | M.Ngos1291ORF5755P (100% identity) | M.NgoSW0259ORF45P | |
50 | 184 aa hypothetical protein | |||
1530 | phenylalanine--tRNA ligase subunit alpha | |||
1535 | V | V.NgoWSORF391P (100% identity) | V.NgoSW0259ORF1540P | |
1540 | M | M.Ngos1291ORF7230P (100% identity) | M.NgoSW0259ORF1540P | |
1545 | 81 aa hypothetical protein | |||
1550 | R | NgoWSORF391P (100% identity) | NgoSW0259ORF1540P | |
1555 | phenylalanine--tRNA ligase subunit beta | |||
1825 | IS1595 family transposase | |||
1830 | RM | NgoSW0223ORF1840P (100% identity) | GACNNNNNTGA | NgoSW0259ORF1830P |
1835 | S | S.Ngos1291ORF7515P (100% identity) | GACNNNNNTGA | S.NgoSW0259ORF1830P |
1840 | 140 aa hypothetical protein | |||
1860 | uroporphyrinogen decarboxylase | |||
1865 | H | H.Ngos1291ORF7560P (100% identity) | H.NgoSW0259ORF1875P | |
1870 | R | Ngos1291ORF7560P (100% identity) | GCSGC | NgoSW0259ORF1875P |
1875 | M | M.Ngos1291ORF7560P (100% identity) | GCSGC | M.NgoSW0259ORF1875P |
??? | 92 aa hypothetical protein TUM15762_01470 | |||
3420 | 3-isopropylmalate dehydrogenase | |||
3425 | R | NgoWSORF784P (100% identity) | GGNNCC | NgoSW0259ORF3430P |
3430 | M | M.NmeMBW2ORFJP (100% identity) | GGNNCC | M.NgoSW0259ORF3430P |
3435 | 3-isopropylmalate dehydratase small subunit | |||
4395 | anthranilate synthase component I | |||
4400 | M | M.NgoSW0274ORF4425P (100% identity) | GCCGGC | M.NgoSW0259ORF4400P |
4405 | R | Ngos1291ORF10080P (100% identity) | GCCGGC | NgoSW0259ORF4400P |
4410 | 5-(carboxyamino)imidazole ribonucleotide | |||
5805 | replication initiation factor domain-containing | |||
5810 | V | V.Ngos1291ORF65P (100% identity) | V.NgoSW0259ORF5820P | |
5815 | R | Ngos1291ORF65P (100% identity) | NgoSW0259ORF5820P | |
??? | M | M.Ngos1291ORF65P (100% identity) | M.NgoSW0259ORF5820P | |
5830 | type IV pilin protein | |||
6005 | excinuclease ABC subunit UvrA | |||
6010 | R | Ngos1291ORF260P (100% identity) | CCGCGG | NgoSW0259ORF6015P |
6015 | M | M.Ngos1291ORF260P (99% identity) | CCGCGG | M.NgoSW0259ORF6015P |
6020 | transposase | |||
9050 | FUSC family protein | |||
9055 | R | NgoSW0236ORF9080P (99% identity) | GGCC | NgoSW0259ORF9060P |
9060 | M | M.Ngos1291ORF3515P (100% identity) | GGCC | M.NgoSW0259ORF9060P |
9065 | ribosome recycling factor | |||
9595 | 93 aa hypothetical protein | |||
9600 | R | NgoWSIIIP (100% identity) | GGTGA | NgoSW0259ORF9605P |
9605 | M | M1.NgoSW0236ORF9630P (100% identity) | GGTGA | M1.NgoSW0259ORF9605P |
9610 | M | M2.Ngos1291II (100% identity) | GGTGA | M2.NgoSW0259ORF9605P |
9615 | RNA-binding transcriptional accessory protein | |||
10135 | GTPase ObgE | |||
10140 | M | M.NgoSW0018ORF10195P (99% identity) | RGCGCY | M.NgoSW0259ORF10140P |
10145 | R | Ngos1291ORF4640P (99% identity) | RGCGCY | NgoSW0259ORF10140P |
10150 | cysteine--tRNA ligase | |||
Type III | ||||
ORF | Gene | Most similar | Specificity | Name |
2765 | peptidyl-prolyl cis-trans isomerase | |||
2770 | M | M.NgoSW0223ORF2790P (98% identity) | CCACC | M.NgoSW0259ORF2770P |
2775 | R | Ngos1291ORF8455P (100% identity) | CCACC | NgoSW0259ORF2770P |
2780 | tRNA 2-thiocytidine(32) synthetase TtcA | |||
3225 | alpha-hydroxy-acid oxidizing protein | |||
3230 | R | Ngos1291ORF8930P (100% identity) | NgoSW0259ORF3235P | |
3235 | M | M.NgoNG250ORF5080P (100% identity) | M.NgoSW0259ORF3235P | |
3240 | 48 aa hypothetical protein |