Neisseria gonorrhoeae SW0236 |
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Putative Neisseria gonorrhoeae SW0236 RM systems
Ref: Iyer,M.S. et al. unpublished
REBASE ref # 31417
Complete sequence: 2,148,016 bp
GenBank #: CP061485
REBASE acronym: NgoSW0236
Org_num: 45346
All begin IBX82_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 2035 | ADP-glyceromanno-heptose 6-epimerase | |||
| 2040 | M | M.Ngos1291ORF7750P (100% identity) | M.NgoSW0236ORF2040P | |
| 2045 | DNA damage-inducible protein D | |||
| 2050 | S | S1.NgoWSII (100% identity) | GCANNNNNNNNTGC | S1.NgoSW0236ORF2040P |
| 2055 | S | S2.NgoWSII (100% identity) | GCANNNNNNNNTGC | S2.NgoSW0236ORF2040P |
| 2060 | R | NgoSW0259ORF2065P (99% identity) | NgoSW0236ORF2040P | |
| 2065 | ATP-dependent Clp protease ATP-binding subunit | |||
| 3535 | replication-associated recombination protein A | |||
| 3540 | R | NgoFQ35ORF5510P (99% identity) | GAGNNNNNTAC | NgoSW0236ORF3565P |
| 3545 | hydroxyacid dehydrogenase | |||
| 3550 | S | S.NgoWSI (100% identity) | GAGNNNNNTAC | S.NgoSW0236ORF3565P |
| 3555 | 186 aa hypothetical protein | |||
| 3560 | 280 aa hypothetical protein | |||
| 3565 | M | M.NgoNG250ORF4770P (99% identity) | GAGNNNNNTAC | M.NgoSW0236ORF3565P |
| 3570 | ABC transporter | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 30 | leucine--tRNA ligase | |||
| ??? | R | NgoSW0274ORF40P (100% identity) | GATC | NgoSW0236ORF40P |
| 45 | site-specific DNA-methyltransferase | |||
| 40 | restriction endonuclease | |||
| ??? | M | M.NgoSW0274ORF45P (99% identity) | M.NgoSW0236ORF45P | |
| 55 | 184 aa hypothetical protein | |||
| 1510 | phenylalanine--tRNA ligase subunit alpha | |||
| 1515 | V | V.NgoSW0032ORF1550P (100% identity) | V.NgoSW0236ORF1520P | |
| ??? | M | M.NgoWSORF391P (100% identity) | M.NgoSW0236ORF1520P | |
| 1530 | R | Npo18661ORFHP (100% identity) | NgoSW0236ORF1520P | |
| 1535 | phenylalanine--tRNA ligase subunit beta | |||
| 1835 | uroporphyrinogen decarboxylase | |||
| 1840 | H | H.Ngos1291ORF7560P (100% identity) | H.NgoSW0236ORF1850P | |
| 1845 | R | Ngos1291ORF7560P (100% identity) | GCSGC | NgoSW0236ORF1850P |
| 1850 | M | M.Ngos1291ORF7560P (99% identity) | GCSGC | M.NgoSW0236ORF1850P |
| ??? | 92 aa hypothetical protein TUM15762_01470 | |||
| 3425 | 3-isopropylmalate dehydrogenase | |||
| 3430 | R | NgoWSORF784P (100% identity) | GGNNCC | NgoSW0236ORF3435P |
| 3435 | M | M.NmeMBW2ORFJP (100% identity) | GGNNCC | M.NgoSW0236ORF3435P |
| 3440 | 3-isopropylmalate dehydratase small subunit | |||
| 4400 | anthranilate synthase component I | |||
| 4405 | M | M.NgoSW0032ORF4420P (100% identity) | GCCGGC | M.NgoSW0236ORF4405P |
| 4410 | R | Ngos1291ORF10080P (100% identity) | GCCGGC | NgoSW0236ORF4405P |
| 4415 | 5-(carboxyamino)imidazole ribonucleotide | |||
| 5845 | replication initiation factor domain-containing | |||
| 5850 | V | V.Ngos1291ORF65P (100% identity) | V.NgoSW0236ORF5860P | |
| 5855 | R | Ngos1291ORF65P (100% identity) | NgoSW0236ORF5860P | |
| ??? | M | M.Ngos1291ORF65P (100% identity) | M.NgoSW0236ORF5860P | |
| 5870 | type IV pilin protein | |||
| 6045 | excinuclease ABC subunit UvrA | |||
| 6050 | R | Ngos1291ORF260P (100% identity) | CCGCGG | NgoSW0236ORF6055P |
| 6055 | M | M.Ngos1291ORF260P (100% identity) | CCGCGG | M.NgoSW0236ORF6055P |
| 6060 | transposase | |||
| 9070 | FUSC family protein | |||
| 9075 | R | NgoFQ48ORF12300P (100% identity) | GGCC | NgoSW0236ORF9080P |
| 9080 | M | M.Ngos1291ORF3515P (100% identity) | GGCC | M.NgoSW0236ORF9080P |
| 9085 | ribosome recycling factor | |||
| 9620 | 93 aa hypothetical protein | |||
| 9625 | R | NgoWSIIIP (99% identity) | GGTGA | NgoSW0236ORF9630P |
| 9630 | M | M1.NgoSW0259ORF9605P (100% identity) | GGTGA | M1.NgoSW0236ORF9630P |
| 9635 | M | M1.NgoWSIII (100% identity) | GGTGA | M2.NgoSW0236ORF9630P |
| 9640 | RNA-binding transcriptional accessory protein | |||
| 10160 | GTPase ObgE | |||
| 10165 | M | M.Ngos1291ORF4640P (100% identity) | RGCGCY | M.NgoSW0236ORF10165P |
| 10170 | R | Ngos1291ORF4640P (100% identity) | RGCGCY | NgoSW0236ORF10165P |
| 10175 | cysteine--tRNA ligase | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2760 | peptidyl-prolyl cis-trans isomerase | |||
| 2765 | M | M.NgoSW0032ORF2780P (81% identity) | M.NgoSW0236ORF2765P | |
| ??? | R | NgoWSORF647P (32% identity) | NgoSW0236ORF2765P | |
| 2775 | tRNA 2-thiocytidine(32) synthetase TtcA | |||
| 3230 | alpha-hydroxy-acid oxidizing protein | |||
| 3235 | R | NgoWFORF680P (99% identity) | NgoSW0236ORF3240P | |
| ??? | M | M.NgoSH204ORFKP (99% identity) | M.NgoSW0236ORF3240P | |
| 3255 | tRNA pseudouridine(55) synthase TruB | |||